Sciurus carolinensis (gray squirrel): 124958136
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Entry
124958136 CDS
T08117
Name
(RefSeq) tripartite motif-containing protein 34-like
KO
K11999
tripartite motif-containing protein 6/22/34
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124958136
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124958136
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-B_box
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
zf-RING_2
RING_XB3-XBAT31
DUF7231
zf-RING_6
PRY
GLE1
Motif
Other DBs
NCBI-GeneID:
124958136
NCBI-ProteinID:
XP_047371827
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All DBs
Position
11:complement(72318769..72347953)
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AA seq
495 aa
AA seq
DB search
MTGGSQGSKAMASKVLVNIQEEARCPICLKHLIEPLTLGCGHSFCQACIARRKKSVTSPG
GENTCFTCNIRNLFGNPRANQPLTDIAKELREVKLSPNIRQSGNFCAHHGEKLLLFCEED
RKVICWLCERSQEHRGHRTFLMDEVTQECQDKLQAALQRLKKEQEEAEKLEADLREEIIS
WKYQVQTERERIQTEFNHLRRILDSEEQRELQRLDGEEKMILDRLAEAEDELVQQTQLVK
ELISDLECRSQWPVVELLQDMSGIMKWGEIWTLKKPKTVSKKLKTVFRAPDLSGMLQSFR
ELTDVQHHWVDLTLDSGNLNLNLVLSEDQRQVMSVPIWPVKCYNYGILGSQHFSSGKHYW
EIDVSKKTSWILGVYCRKRSVKFAVRKGSNSPNVFSKYRPQYGYWVIGLQNEFEYNVFED
SSSSDPKVLALFMAIPPRRVGVFLDYEAGTVSFFNITNHGSLIYKFSKCRFSQPAYPYFN
PWKCTAPMTLCPPNC
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgacaggaggaagccaggggagcaaggcaatggcttcaaaagtcctggtgaacatacag
gaagaggcaagatgtcccatctgcctaaagcatttaatagagccactgactctaggctgt
ggccacagcttttgccaagcatgcatcgccaggaggaagaagtcagtgaccagcccaggt
ggggaaaacacttgttttacatgtaatatcaggaacttatttggaaatccaagggctaat
cagcctctgactgacatagcaaaagaactcagggaagtcaagttgagccccaacattagg
cagagtggaaacttttgtgcacaccatggagagaaactcctactcttctgtgaggaggac
aggaaggtcatttgctggctttgtgagcgttctcaggagcaccgtggtcaccgcacattc
ctcatggatgaggtaacccaggaatgtcaggacaagctccaggcagctcttcagaggctg
aagaaggaacaagaagaagctgaaaaattggaagctgatcttagagaagagataatttct
tggaagtatcaggtacaaactgagagagaaaggatacaaacagaatttaatcatcttaga
agaatcctggacagtgaggaacagagagagctgcaaagattggatggggaggagaagatg
atactggatcgcttggcagaggctgaggatgagcttgttcagcagacccagttggtgaaa
gagctcatctcagatctagagtgtcggagtcaatggccagtggtggagctcctgcaggac
atgagcggaatcatgaaatggggtgagatctggactctgaagaagccaaaaactgtatcc
aagaagctgaagactgtattccgtgctccagatctgagtgggatgctgcaaagcttcaga
gagctaacagatgtccagcaccactgggtggacttaacactggattcaggcaacctaaat
ttgaatcttgttctttcagaagatcagagacaagtgatgtctgtgccaatttggccagtt
aagtgttataattatggcatcttaggctctcaacatttctcctcagggaaacattactgg
gaaatagatgtatccaaaaagaccagctggatcctgggagtatactgtagaaaacgttct
gtgaagtttgctgtgagaaaaggttcaaattctccaaatgttttctccaaatacagacct
cagtatggctactgggttataggtttacagaatgaatttgagtacaatgtctttgaggat
tcttccagttctgatcctaaggtgttggccctcttcatggctattcctccccggcgtgtt
ggggttttcctcgactatgaagcaggcacagtctcatttttcaacatcacaaaccatggg
tcactcatctacaagttctctaaatgtcgcttttctcagcctgcatatccatatttcaat
ccttggaagtgtacagcccccatgacgctgtgcccaccaaactgctaa
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