Sciurus carolinensis (gray squirrel): 124958137
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Entry
124958137 CDS
T08117
Name
(RefSeq) tripartite motif-containing protein 6 isoform X1
KO
K11999
tripartite motif-containing protein 6/22/34
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124958137
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124958137
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4_4
zf-B_box
zf-C3HC4
zf-C3HC4_2
PRY
zf-RING_5
zf-RING_2
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_6
zf-Nse
zf-RING_10
Spore_III_AB
Phg_2220_C
CFAP58_CC
U-box
zf-RING_4
zf-UDP
Motif
Other DBs
NCBI-GeneID:
124958137
NCBI-ProteinID:
XP_047371830
LinkDB
All DBs
Position
11:complement(72359203..72373386)
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AA seq
488 aa
AA seq
DB search
MTSTVLVDIRDEVTCPLCLQLLTEPLSIDCGHSFCQACIIENSEESEMGQEGESSCPVCQ
TSYQPRNLRPNRHLANIAERLREVVLCPGKQLEVILCRHHGEKLQLFCKEDGKLICWLCE
RSQEHRGHHTFLMEEVAQEYQEMFQESLKKLRKEQQEAERLKAVIKEKRASWKNQMEPER
QRIQTEFNQLRSILDKEEQRELKKLEEEERKGLSVIEKAEGELIYQSQSLEELISDLEHR
CQGSVMDLLQDVSDIIQRSEFWTLRKPPALPTKLRSMFRAPDLKKMLRVFRELTDVQSYW
VDVTMNPHTANLNLVLSKNRRQVRFVGAKLSEPSCLEEHHDCSVLGSQHFSSGKYYWEVD
VTRKTAWILGVCSNSLEPAFSCSQFANKQNAYSRYQPQTGYWVIGLQHKREYRAYEDAST
SLLLSMTVPPRRVGVFLDYEAGTVSFYNVTNHGLPIYTFSKYYFPTAVCPYFNPCDCVVP
MTLRRPSS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaacggttctggtggacatccgagatgaggtgacctgccccctctgcctgcag
ctcctgacagagcccctgagcatagactgtggccacagcttctgccaggcttgcatcata
gagaatagtgaggaatcagagatgggccaagaaggggagagcagctgtcccgtgtgccaa
accagctaccagcccaggaacctccggcctaatcggcacctggccaacatagcggagcgg
ctcagagaggtagtgttgtgcccggggaagcagctggaggtaattctttgtagacaccat
ggagagaaactccagctcttctgtaaagaggatgggaagctaatttgctggctttgtgag
cgttctcaggaacaccgtggtcaccatacatttctcatggaggaggtcgcccaggaatac
caggagatgttccaggagtctctgaagaagttgagaaaagagcagcaggaagctgagagg
ctgaaagctgttatcaaagagaagagggcatcctggaagaatcagatggagcctgagaga
cagaggatccagacagagtttaaccagctgcgaagtatcctggacaaagaggaacagcgg
gaactgaagaagctggaggaggaagagaggaaggggctgagcgttatagagaaagctgaa
ggggagctgatctaccagagccagtcactggaagagctcatctcagatctggagcatcga
tgccagggctcagtaatggatctgctgcaggatgtgagtgatatcatacaaaggagtgaa
ttctggaccctgaggaagccccctgctctgcctaccaagctgagaagtatgtttcgagcc
ccagatctgaaaaagatgctgcgagtgtttcgagagctgacagatgtccagagctactgg
gtggacgtgactatgaatccccacacggctaatttaaatcttgtcctgtcaaaaaaccgg
agacaggtgagattcgtgggtgccaagctgtctgagccctcctgtctggaagaacatcat
gactgtagcgtcctgggctctcagcacttctcctcaggaaaatactactgggaagtcgat
gtgaccaggaagactgcctggatcctgggggtgtgcagcaattccttggaacctgcattc
tcttgcagccagtttgctaacaaacagaatgcctattccaggtaccaaccccagaccgga
tactgggtgattgggttgcagcataaacgtgaatacagagcctacgaggatgcttccact
tccctgctcctttctatgacagtgccccctcgccgcgttggagttttcttagactatgag
gctggtactgtctccttttataatgtcaccaaccatggcttgcccatctacaccttctct
aaatattattttcctactgccgtttgtccttattttaatccctgcgactgtgtagtcccg
atgaccctgcgtcgcccaagctcctga
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