Sciurus carolinensis (gray squirrel): 124958145
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Entry
124958145 CDS
T08117
Name
(RefSeq) CUGBP Elav-like family member 1 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncar03041
]
124958145
Spliceosome [BR:
ncar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124958145
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_7
RRM_5
UVB_sens_C
Motif
Other DBs
NCBI-GeneID:
124958145
NCBI-ProteinID:
XP_047371840
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Position
11:32053419..32134210
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AA seq
514 aa
AA seq
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MAAFKLDFLPEMMVDHCSLNSSPVSKKMNGTLDHPDQPDLDAIKMFVGQVPRTWSEKDLR
ELFEQYGAVYEINVLRDRSQNPPQSKGCCFVTFYTRKAALEAQNALHNMKVLPGMHHPIQ
MKPADSEKNNAVEDRKLFIGMISKKCTENDIRVMFSSFGQIEECRILRGPDGLSRGCAFV
TFTTRAMAQTAIKAMHQAQTMEGCSSPMVVKFADTQKDKEQKRMAQQLQQQMQQISAASV
WGNLAGLNTLGPQYLALYLQLLQQTASSGNLNTLSSLHPMGGLNAMQLQNLAALAAAASA
AQNTPSGTNALTTSSSPLSVLTSSAGSSPSSSSSNSVNPIASLGALQTLAGATAGLNVGS
LAGMAALNGGLGSSGLSNGTGSTMEALTQAYSGIQQYAAAALPTLYNQNLLTQQSIGAAG
SQKEGPEGANLFIYHLPQEFGDQDLLQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNP
VSAQAAIQSMNGFQIGMKRLKVQLKRSKNDSKPY
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgtttaagttggatttccttccagaaatgatggtggatcattgctctttgaat
tccagtcctgtctccaagaaaatgaacggcaccctggaccacccagatcaaccggatctt
gatgctattaagatgtttgtgggccaggttccaaggacctggtctgagaaggacttaagg
gaactcttcgaacagtatggtgctgtctatgaaatcaacgtcctaagggataggagccaa
aaccctcctcagagcaaagggtgctgttttgttacattttacacccgtaaagctgcatta
gaagcgcagaatgctcttcacaacatgaaggtcctcccagggatgcatcatcctatacag
atgaaacctgctgacagcgaaaaaaacaatgcagtggaagacaggaagctgtttattggt
atgatttccaagaagtgcactgaaaatgacatccgagtcatgttctcttcatttggacag
attgaagagtgccggatattgcggggacctgatggcctgagccgaggttgtgcatttgta
acttttacaacaagagccatggcacagacggctatcaaggcaatgcatcaagcacagacc
atggagggttgctcatcccccatggtggtaaaatttgctgatacgcagaaggacaaagaa
cagaagagaatggcccagcagctccagcaacagatgcagcaaatcagcgcagcatctgtg
tggggaaaccttgctggtttaaatactcttggaccccagtatttagcactttatttgcag
ctccttcagcagactgcctcctctgggaacctcaacaccctgagcagcctccacccaatg
ggagggttaaatgcaatgcagttacagaatttggctgcactagctgctgcagctagcgca
gctcagaacacaccaagtggtaccaatgctctcactacatccagcagtcccctcagcgta
ctcaccagttcagcagggtcctcacctagctccagcagcagtaactctgtcaacccaata
gcctcacttggagccctgcaaacattagctggagcaacagctggcctcaatgttggctct
ctggcagggatggctgctttaaatggtggcctgggcagcagtggcctttccaatggcact
gggagcaccatggaggccctcacccaggcctactcgggtatccaacaatatgctgctgca
gcgcttcccactctgtacaaccagaatctcttgacacagcagagtattggtgctgctgga
agccagaaggaaggtccagaaggagccaatctgttcatttaccacctgccccaggagttt
ggagatcaggatctgctgcagatgtttatgccctttgggaatgtcgtgtctgccaaggtt
tttatagataagcagacaaacctgagcaaatgttttggttttgtaagttacgacaatcct
gtttctgctcaagctgccatccagtccatgaacggctttcaaattggcatgaagaggctt
aaagtgcagctcaaacgttcgaagaatgacagcaagccctactga
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