Sciurus carolinensis (gray squirrel): 124958159
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Entry
124958159 CDS
T08117
Name
(RefSeq) syntaxin-3 isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04130
SNARE interactions in vesicular transport
ncar04721
Synaptic vesicle cycle
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
124958159
09150 Organismal Systems
09156 Nervous system
04721 Synaptic vesicle cycle
124958159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124958159
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124958159
Membrane trafficking [BR:
ncar04131
]
SNARE
Syntaxin (Qa)
Stx-PM
124958159
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
124958159
Exosomal proteins of other body fluids (saliva and urine)
124958159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
Branch
MG280
DUF3040
Relaxase_C
GyrB_insert
Podoplanin
SIMPL
T2SSF
DUF6218
DUF6584
Motif
Other DBs
NCBI-GeneID:
124958159
NCBI-ProteinID:
XP_047371881
LinkDB
All DBs
Position
11:complement(15121154..15163437)
Genome browser
AA seq
288 aa
AA seq
DB search
MKDRLEQLKAKQLTQDDDADEVEIAIDNTAFMDEFFSEIEETRLNIDKISEHVEEAKKLY
SIILSAPIPEPKTKDDLEQLTTEIKKRANNVRNKLKSMERHIEEDEVRSSADLRIRKSQH
SVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEITGKKTTDEELEEMLESGNPAIFTSG
IIDSQISKQALSEIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTV
DHVEKARDETKRAVKYQGQARKKLIIIIVIVVVLLGILALIIGLSVGL
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccggctggagcagctgaaggcgaagcagctgacacaggatgatgatgcggac
gaggtggagatcgctattgacaacacagctttcatggatgaattcttttctgagatcgag
gagactcggctcaacattgacaagatctcagagcatgtggaggaagcaaagaaactctac
agtatcattctctctgcaccaattccagagccaaaaaccaaggatgaccttgaacagctt
acaactgagatcaagaaaagggccaacaatgtccggaataaactgaagagcatggagagg
catattgaagaagatgaggtccggtcgtcagcagaccttcggattcggaaatctcagcac
tccgtcctctctcggaagtttgtggaggtgatgaccaagtacaatgaggcccaggtggac
tttcgtgaacgcagcaaagggcgaatccagcggcagcttgaaattactggcaaaaagaca
acagatgaggagctggaggagatgctagagagtggcaaccctgccatcttcacttctggg
atcattgactcccagatttccaagcaagccctcagtgagatcgagggtcggcataaggac
attgtgaggctggagagcagcattaaagaacttcatgacatgtttatggacatcgccatg
ctggtggagaatcagggtgagatgttagataacatagagttgaatgtcatgcacacagtg
gaccacgtggaaaaggcacgggatgaaactaaaagagctgtgaaatatcagggtcaggcc
cgaaagaaattgataattatcattgtgatagtagttgtgttgctgggcattttagcattg
attattggactttccgtcggactgtaa
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