Sciurus carolinensis (gray squirrel): 124958212
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Entry
124958212 CDS
T08117
Name
(RefSeq) E3 ubiquitin-protein ligase RNF169
KO
K20805
E3 ubiquitin-protein ligase RNF169 [EC:
2.3.2.31
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124958212
03400 DNA repair and recombination proteins [BR:
ncar03400
]
124958212
Enzymes [BR:
ncar01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
124958212
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
124958212
DNA repair and recombination proteins [BR:
ncar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
Other DSBR factors
Ubiquitin ligases
124958212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-C3HC4
zf-RING_2
zf-C3HC4_2
zf-RING_UBOX
zf-RING_5
zf-RING_10
Prok-RING_4
RING_XB3-XBAT31
EF-hand_14
zf-RING_4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
124958212
NCBI-ProteinID:
XP_047371998
LinkDB
All DBs
Position
11:77241535..77334449
Genome browser
AA seq
703 aa
AA seq
DB search
MAAAGPSTRASSAAAAAALSRRGRRGRCDEMAAGKSGAPGQGSGPALLVLPPPPLRPEES
SCAGCLETPGEAAALPCGHSLCRGCAQRAADAAAPGCPRCRARGPGWARRRARDDGQADA
EVLGERARRGQPERCRPRRDGGAAAVGPRPEQEPRAAPAEPEFIFRAPIKISKPGELREE
YECLRKLREEKLQEEKTSEDQIHKLLPEDTETGKRKIDEQKKRDEPLGLKTNLEHCPARL
SDSENEEPSRGQMIQTHRSAFVSKNNSYSLAFLAGKLNCKVQRSQSCSDTAQDRVKNRLR
AAPTIKAKVTTMTPASNPIIGVLLSTQNNRCLSAPDLTIEKRLPFSSLSSLASLHKPERS
ISPESNDSISEELNHFKPIVCSPCTPPKRLPDGRVLSPLIIKSTPRNLNRSLQKQTSYEA
SPRILKKWEQIFQERQIKKTLSKATLTSLASETGEDLISSEIIHSSKEKPLLDLNTRLSS
GQVLSEDIGPTPNTDLEYFPSVSQTKAEEDSDGKRSTEIPLETCCSSELKGGASGTSLEG
EQFEGSGSIPDTRLDKTYINPAVKISTVNSVLPKNNVLGGVLKTKKQLKTLNHFDLANGV
LVDSLGEEPLPSLRRGRKRRCKTKHLEQNGSLKKLRQTSSEVGLASTDPALREMEQKLQQ
EEEDRQLALQLQRMFDNERRTVSRRKGSVDQYLLRSSSMAGAK
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcaggtccgagtactcgggcctcttccgcggcggcagcagcggctctgagt
cggcgaggccggcggggccgctgtgacgagatggcggcagggaagagtggggccccgggc
cagggctctggccctgcgttgttggtgttgccgccgccaccgctgcggccggaggagtcg
agctgcgccgggtgcctggagaccccaggggaagcggcggccctgccgtgcggccactcg
ctgtgcagaggctgcgcccaacgcgccgccgacgcggcggccccgggctgcccgcgctgc
cgcgcccgcggcccgggctgggcccgccgtcgagcccgcgacgacggccaggccgacgcg
gaggtgctgggcgagcgcgcccgccgcggccaaccagagcgctgccgcccgcgccgggac
gggggcgcggccgctgtggggcccaggccggagcaggaaccccgcgccgcacccgcggag
ccagagtttatatttagagcaccaatcaaaataagcaagcctggggaacttcgtgaggaa
tatgaatgcctgagaaagctgagagaagagaagttgcaagaggaaaaaacttctgaagat
caaattcacaagctattaccagaggacacagaaacagggaaaaggaaaatagatgaacag
aaaaaaagagatgagccattaggactgaaaacaaacctggaacattgtcctgcacgtctc
tcagattcagagaatgaagaaccttctcgaggccagatgatacagacacatcgctcagca
tttgtttccaagaacaactcctactccttagctttcctggcagggaagctaaactgcaag
gtgcagaggagtcagagctgcagtgacacagctcaggacagagtgaagaacagactcaga
gcagctccaaccatcaaagccaaggtcacaactatgactccagcctccaaccccatcatt
ggtgtcctcttgtccactcaaaacaaccgctgtctctcagcccctgacttaaccatcgaa
aagcgtctgcccttcagctccctctcatccttggcttccctacataagccagagcgctct
atcagtcctgagagcaatgacagcatctctgaagaactgaaccatttcaaacccattgtg
tgctcaccatgtactccccctaagagactccctgatggccgcgtgctgagtcccctcatc
atcaagtcaacacctcgcaacctaaacagaagcctgcagaagcagacttcttatgaggcc
agtccccggatcctcaaaaagtgggaacagatctttcaagagcggcagatcaaaaagacc
ctttcaaaagccactctcacctccctggcatctgaaacaggagaagacttaataagttct
gaaattatccattctagcaaggagaagccacttctggatttaaacacaagactctccagt
gggcaggtactctctgaggatattggacccactcccaatactgaccttgagtatttcccc
tcagttagccaaacaaaagcagaagaggacagtgatggtaaaaggagcactgagatccca
ttggaaacctgctgttcctcagaactcaaagggggagccagtgggacttctttggagggg
gagcagtttgaggggtcagggtcaatcccagataccaggttagacaaaacttatataaac
ccagccgtgaaaatctcaacagttaattcagtgctacccaaaaacaatgttttgggtgga
gtcctcaaaacaaagaaacagctgaagacattaaatcattttgatctagctaatggtgtt
ttggtagacagcctgggtgaagagccacttccttccttgcggcggggccgaaaaagacgc
tgtaagaccaagcacttggaacagaatggctcccttaagaaactgcgacagaccagcagt
gaggtgggtctggcctcaacagacccagcacttcgagagatggaacagaagttgcagcaa
gaggaagaggaccgacaactggctctccaattgcaacgcatgtttgacaacgagaggcgg
actgtgagtcggcgaaaaggaagcgtggatcagtatctcctgcggtccagcagcatggct
ggggccaagtag
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