Sciurus carolinensis (gray squirrel): 124958290
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Entry
124958290 CDS
T08117
Name
(RefSeq) rod outer segment membrane protein 1-like
KO
K17344
rod outer segment membrane protein 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ncar03037
]
124958290
Cilium and associated proteins [BR:
ncar03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
124958290
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Gene cluster
GFIT
Motif
Pfam:
Tetraspanin
Motif
Other DBs
NCBI-GeneID:
124958290
NCBI-ProteinID:
XP_047372166
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Position
11:complement(12461190..12465161)
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AA seq
670 aa
AA seq
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MLRAPGAEEHAGTPPDSRTALAAPDGPALREGARRPPRPVLTGPRGPVHPAPGLLRAAAA
EASKPRGPWPGRGEGEAPRGAREGVPCHPPGALSGAGKGPGGGAVGPGPQSLGLAGASDS
PGAALGSRGWGGGAVPGPSSAAQTGAGRGAARKRGRGGGPEGGLGRLLTPPCPGLAAQHG
GGASPLTPHPLPVCGLQALPGSPPRGLHGIGEGADPVVSTPSPKPGWTERTKPPTSARGR
GGVTKWALCPGAELFLRGKAKASQIGAGGRLLKLGWKDVQGIGVRVALAQLKPGWADSAS
CPQSTPSPTVLHSLGQRWEMAPVLPLVLPLQSRIRLAQGLWLLSWLLALAGVLTLLCSGH
LLVQLQYLGTFLAPSCPFSSLPQVALAAGAVALGTGLGGAGASRASLDAARYPPWRGILG
PLLVAGTAGGGGLLVFALGLALGLPVSLDKGLEEGLGTALVHYKDTEVPGHCHAKRIMDE
LQLRHHCCGRHGYKDWFGVQWVSNRYLDPSDQEVVNRIQSNVEGLYLTDGVPFSCCNPHS
PRPCLQSQLSDPYAHPLFDPRQPNLNLWAQGCHQVLLDHLQSLASTLGSILAVTFLLQAL
VLLGLRYLQTALEGLGGVIDAEGEAQGYLFPGGLKDMLKTAWLQGGVAHRAAPEKTPPEE
VPPKEDLPEA
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgctcagagcccctggggcggaggagcacgcgggcacgccaccagacagccgcacggca
ctggcagcgcccgacgggccggcgctccgggaaggggcacgccgcccgccccgccccgta
ctcaccgggccccgaggccccgtccatccggcccccgggttgctgcgagcggcagcggcg
gaggcgtctaagccgcgggggccatggcctgggagaggggaaggggaagcaccccggggc
gcgcgcgaaggcgtgccgtgccaccccccgggggcgctgtcgggcgcggggaaagggcct
ggagggggcgctgtggggccggggccacagtcgctggggctcgccggggcctccgactct
cccggggccgctctcggctcccgggggtggggtggcggggccgtcccgggccccagctcc
gcagcacaaacaggcgccggacgcggagccgccaggaagcgcgggagggggggcggaccc
gagggggggctgggccgcctactaacccctccctgtccgggcctcgctgctcagcacggg
ggcggggccagtccgctgacccctcaccccctgcccgtctgcggcctccaggcccttccg
ggatccccgccccggggattgcatgggatcggggagggagcagaccctgtggtctccacc
cccagccccaagcccggttggactgagcggaccaaaccccccacttccgcgaggggcagg
ggcggggtcacgaaatgggccctctgcccgggggcggagcttttcctaaggggcaaggcc
aaggcatcccaaattggggctggcggaaggttattaaagctggggtggaaggatgtgcag
ggtattggggtcagggtggcattagcccagctcaagccgggctgggctgactcagcatcc
tgcccgcagtcaaccccatccccgacggttctgcactccctcgggcagcgatgggagatg
gcgccggtgttgcccctggtgctgcccctccagtcccgcatccgactggctcaggggctc
tggctcctctcctggctgttggcactggccggtgtcctcaccctcctctgtagcggccac
ctccttgtccagctgcagtaccttggcaccttcctggctccctcctgcccattctcttcc
ctgccccaggttgcactggcagctggtgcagtggctctgggcacaggactggggggtgcg
ggagccagccgagcaagtctggatgcagctcgctaccctccctggcgaggaatcctgggc
ccgctgctggtggctggcactgctggaggtgggggactcttggtctttgccctggggcta
gctctgggtttgcctgtgagtctggacaaggggctggaggagggtctggggactgctctg
gttcactacaaggacacagaggtacctgggcactgtcatgcgaaacggataatggatgag
ctgcagctgaggcaccactgctgcgggcgccacggctacaaggattggtttggagtccaa
tgggtcagcaaccgttacctggaccccagtgaccaggaagtggttaaccgaatccagagt
aatgtggaaggcctgtacctgacagatggggttcccttttcctgctgcaacccccattcc
ccccggccttgcctgcaaagccaactctcagacccctatgctcaccctctcttcgatccc
cgacagcccaacctaaacctctgggcccaaggctgccaccaggtgttgctggaccacctg
cagagcttggcaagcacactgggcagcatactggctgtcaccttcttactgcaggctctg
gtgctccttggcttgcggtacctgcagacagcgctggaagggcttggaggggtcatcgat
gcagaaggagaggcccagggttatctgtttcctggtgggctgaaagacatgctgaaaaca
gcttggctacagggaggggttgcccacagagctgcacctgagaaaaccccaccagaagag
gtacctcccaaggaggacctacctgaggcctaa
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