Sciurus carolinensis (gray squirrel): 124958345
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Entry
124958345 CDS
T08117
Name
(RefSeq) glutamate receptor ionotropic, kainate 3 isoform X1
KO
K05203
glutamate receptor, ionotropic kainate 3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04080
Neuroactive ligand-receptor interaction
ncar04082
Neuroactive ligand signaling
ncar04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124958345
04082 Neuroactive ligand signaling
124958345
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
124958345
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncar04040
]
124958345
Ion channels [BR:
ncar04040
]
Ligand-gated channels
Glutamate (ionotropic)
124958345
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
124958345
NCBI-ProteinID:
XP_047372286
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Position
1:182013744..182220549
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AA seq
919 aa
AA seq
DB search
MTAPWRRLRSLVWEYWAGLLVCAFWIPDSRGMPHVIRIGGIFEYADGPNAQVMNAEEHAF
RFSANIINRNRTLLPNTTLTYDIQRIHFHDSFEATKKACDQLALGVVAIFGPSQGSCTNA
VQSICNALEVPHIQLRWKHHPLDNKDTFYVNLYPDYASLSHAILDLVQYLKWRSATVVYD
DSTGLIRLQELIMAPSRYNIRLKIRQLPIDSDDSRPLLKEMKRGREFRIIFDCSHTMAAQ
ILKQAMAMGMMTEYYHFIFTTLDLYALDLEPYRYSGVNLTGFRILNVDNPHVSAIVEKWS
MERLQAAPRAESGLLDGVMMTDAALLYDAVHIVSVCYQRAPQMTVNSLQCHRHKAWRFGG
RFMNFIKEAQWEGLTGRIVFNKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVA
KGRGPNVTDSLTNRSLIVTTVLEEPFVMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFS
YEIRLVEDGKYGAQDDKGQWNGMVKELIDHKADLAVAPLTITHVREKAIDFSKPFMTLGV
SILYRKPNGTNPSVFSFLNPLSPDIWMYVLLAYLGVSCVLFVIARFSPYEWYDAHPCNPG
SEVVENNFTLLNSFWFGMGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAF
LTVERMESPIDSADDLAKQTKIEYGAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVK
NNEEGIQRTLTADYALLMESTTIEYVTQRNCNLTQIGGLIDSKGYGIGTPMGSPYRDKIT
IAILQLQEEDKLHIMKEKWWRGSGCPEEENKEASALGIQKIGGIFIVLAAGLVLSVLVAV
GEFVYKLRKTAEREQRSFCSTVADEIRFSLTCQRRVKHKPQPPMMVKTDAVINMHTFNDR
RLPGKDSMTCSTSLAPVFP
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaccgctccctggcggcgcctccggagtctggtttgggaatactgggccgggctcctc
gtgtgcgccttctggatcccagactcgcgcgggatgccccacgtcatccggatcggagga
atcttcgagtatgcggacggccccaacgcccaggtcatgaacgccgaggagcacgccttt
cgattttctgccaatatcatcaacaggaacagaaccctgctgcccaacaccactttgact
tacgacatccagaggattcacttccacgacagcttcgaggccaccaagaaggcctgtgac
cagctggccctgggcgtggtggccatcttcggtccgtcgcagggctcctgcaccaatgca
gtccagtccatctgcaacgccctggaggtgccccacatccagctgcgctggaagcaccac
ccgctggacaacaaggacaccttctacgtgaacctctaccccgactacgcctctctcagc
catgccatccttgacctggtccagtacctcaagtggcggtcggccaccgtggtctatgac
gacagtacagggctcatccggctacaggagctcatcatggctccgtcgagatacaacatc
cgcctcaagatccgccagctccccatcgactcggacgactcgcggcccctgctcaaggag
atgaagcgcggccgggaattccgcatcatcttcgactgcagccacaccatggccgcccag
atcctcaagcaggccatggccatgggcatgatgacggagtactaccacttcatcttcacc
actctggacctctacgcactagacctggagccctaccgctactccggggtgaacctgacc
gggttccgcatcctcaacgtggacaacccccacgtctcggccatcgtggagaagtggtcc
atggagcggctgcaggcggctccccgggcagagtccggcctgttggatggagtgatgatg
acggacgcggccttgctctacgacgccgtccacatcgtgtccgtgtgctaccagcgggcg
ccccagatgacggtgaactccctgcagtgccaccggcacaaggcctggcgctttggcggc
cgcttcatgaacttcatcaaggaggctcagtgggaaggattaaccggacggattgttttc
aacaaaaccagtggcttgcggacagattttgatctggacatcatcagcctgaaggaagat
ggtctggagaaggttggggtgtggagccctgccgacgggctcaacatcacggaggttgcc
aaaggccgaggccctaatgtcacagactctctgacaaaccggtcactcatcgtcaccact
gtgctggaggagccctttgtcatgttccggaagtccgacaggaccctctatgggaatgac
cggttcgagggctactgcattgatctgctcaaggagctggcccacatcctgggcttctcc
tatgagatccggctggtggaggacggcaagtacggggcgcaggacgacaagggccagtgg
aatggcatggtcaaggagctcatcgaccacaaggcagacctggccgtggctcccctgacc
atcactcatgtccgtgagaaggccatcgatttctccaagcccttcatgactctcggagtg
agcatcctgtaccgcaagcccaatggcaccaaccccagtgtgttctccttcctcaatccc
ctatccccggatatctggatgtatgtgctcctcgcctacctgggtgtcagctgcgtcctc
tttgtcatcgccaggttcagcccctatgagtggtacgatgcccacccctgcaaccccggc
tccgaggtggtggagaacaacttcactctgctcaacagcttctggttcggaatgggctcc
ctcatgcagcaagggtctgaactgatgcccaaagctctgtccacacgcatcatcgggggc
atctggtggttcttcacgctcatcatcatctcctcctacacggccaacctggccgccttt
ctgaccgtggagcgcatggaatcgcccatcgactctgccgacgacctggccaagcaaacc
aagatcgagtacggggctgtcaaggatggggccaccatgaccttcttcaagaaatccaag
atctctactttcgagaagatgtgggctttcatgagcagcaagccctctgctctggtgaag
aacaacgaggagggtatccagcggacgctgacagcagactacgcgctgctcatggagtcc
accaccatcgaatacgtcactcagaggaactgcaacctcacccagatcgggggcctcatt
gactccaagggctacggcatcggcacgcccatgggctcgccataccgggacaagatcacc
atcgccatcctgcagctgcaggaggaggacaagctgcacatcatgaaggagaagtggtgg
cggggcagcgggtgccccgaggaggagaacaaggaggccagcgccctgggcatccagaag
atcggtggcatcttcatcgtcctggccgccgggctggtcctgtctgtgctggtggccgtg
ggggagttcgtgtacaagctccgcaaaaccgcagagcgagaacagcgttccttctgcagc
actgtggccgatgagatccgtttctccctcacctgccagcgtcgggtcaagcacaagcct
cagcctcccatgatggtcaagactgacgccgtcatcaacatgcacacattcaatgatcgc
cggcttccgggcaaggacagcatgacctgcagcacatccttagcccctgtgttcccctag
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