Sciurus carolinensis (gray squirrel): 124958412
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Entry
124958412 CDS
T08117
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1 isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124958412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124958412
Membrane trafficking [BR:
ncar04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
124958412
Endosome - Golgi transport
Arf GTPase associated proteins
124958412
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
124958412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
RA
PH_11
SAM_1
SAM_2
PH_8
PH_6
Motif
Other DBs
NCBI-GeneID:
124958412
NCBI-ProteinID:
XP_047372370
LinkDB
All DBs
Position
11:complement(75453171..75515976)
Genome browser
AA seq
1441 aa
AA seq
DB search
MAEGGDAALSVAEWLRALHLEQYTGLFEQHGLVWATECQGLSDARLMDMGMLLPGHRRRI
LAGLLRAHVPPSPAPRPTPRPVPMKRHVFRSPPVPITPPESLPTAREDEVPPAAPPIPPR
KSCLPPACFATPSTAAPDPVLPPLPAKRHLVEPSIPPVPPRTGPPRLLVSLPSKEELLLP
PLSSHPQPEPEEPASTVPQRPPCPPEIPPKPPRQPPEFDDSDYDEVPEEGPGAPASVMTK
KEEPPLRQVPRAVRVASLLSEGEELSGDEEDEDDHAYEGVPNGGWHTSGLSLPSPSLTPE
LPPQPMEELPGGSSPITPVIKAGWLDKNPPQGSYIYQKRWVRLDADHLRYFDSNKDAYSK
RFISVAVISRVAAIGDQKFEVITNNRTFAFRAESDVERQEWMQALQQAVAEQRARARLAG
ASLLGVRGSEQPDHAGSLELRGFKNKLYVTVVGDKVQLYKNLEEYHLGIGITFIDMSVGN
VKDADRRSFDLTTPYRIFSFLAESELEKEQWLEAMQGAIAEALSTSEVAERIWTAAPNRF
CADCGAAQPDWASINLCVVICKRCAGEHRGLGAGVSKVRSLKMDRKVWTETLIELFLQLG
NGAGNRFWAANVPPSEALQPSSSPVARRHHLEAKYKEGKYRRYHPLFGNQEELDKALCAA
VTTSDLAETQALLGCGAGVNCFSGDLQAATPLALAEQAGQTLQMEFLRNNQTMEVPRLDS
MKPLEKHYSVVLPTVSHSGFLYKTASAGKLLQDRRAREEFSRRWCVLSDGVLSYYENERT
VTPNGEIRASEIVCLAVPPPDTHGFEHTFEVYTEGERLYLFGLESAELAHEWVKCIAKAF
VPPLAEELLTRDFERLGRLPYKAGLSLQRAQEGWFALTGSELRAVFPEGPCEEPLQLRRL
QELSIQGDSENQVLVLVERRRTLYIQGERRLDFMGWLGAIQKAAASLGDTLSEQQLGDSD
IPVIVYRCVDYITQCGLTSEGIYRKCGQTSKTQRLLESLRQDARSVHLKEGEQHVDDVSS
ALKRFLRDLPDGLFTRAQRLAWLEASEIEDEEEKISRYRELLVHLPPVNRATVKALISHL
YCVQCFSDTNQMNTHNLAIVFGPTLFQTDGQDYKAGRVVEDLISHYVVVFSVDEEELRKQ
REEVTAIVKMRVAGTASGTQHAGDFICTVYLEEKKAETEQHVKIPASMTAEELTLEILDR
RNVGIREKDYWTCFEVNEKEEAERPLHFAEKVLPILHSLGTDSHLVVKKHQAMEAMLLYL
ASRVGDTKHGMMKFREDRSLLGLGLPSGGFHDRYFILNSSCLRLYKEVRSQRSWSGAPET
SHRPEKEWPVKSLKVYLGVKKKLRPPTCWGFTVVHETEKHEKQQWYLCCDTQMELREWFA
TFFFVQHDGLVWPSEPSRVSRAAPEVRLGSVSLIPLRGSENEMRRSVAAFAADPLSLLRN
V
NT seq
4326 nt
NT seq
+upstream
nt +downstream
nt
atggcagagggcggggatgctgccttgtcagtggccgagtggctacgggcactgcacctg
gagcagtataccgggctctttgagcagcatggactggtttgggccactgaatgccagggc
ctcagtgatgcccgcctgatggacatgggcatgctgctcccaggacaccgccgccgcatc
ctggctggcctgctccgtgctcatgtacctccatcccctgcaccccgccccacaccgcga
cctgtgcccatgaagcgccacgtgttccgttcaccgcccgtgcccatcactccacctgag
tcgctgcccacagctagagaggatgaggtgccacctgctgccccacccatcccaccccgc
aagagctgccttccgcctgcctgctttgccaccccgtccacagctgccccagaccctgtg
ctgcccccattgcctgccaagcgacatttggtggagccgagcattcctccagtgcctcct
cgcacaggacccccccgcctgctggtgagccttccctccaaggaagagttgttgctgcca
ccactgtcatcccatcctcagccagagccagaggagcctgcatccactgtcccccagagg
cctccctgccccccagagatccctccgaagcctccccgccagccacccgagtttgatgac
tctgactatgatgaagtcccagaggaggggccaggggccccggccagcgtgatgaccaag
aaggaggagcccccactacgccaagtcccacgggccgtgcgcgtggccagtctgctgagt
gagggagaggaactgtccggggacgaggaagatgaggatgaccatgcctacgagggtgtc
cccaatggtggatggcacaccagtggcctgagcttaccctcacccagcctgacccctgag
ctcccaccacaacccatggaggagcttcctgggggctccagccccatcaccccagtcatc
aaggccggctggctggacaagaacccaccacagggatcttatatttatcagaagcgatgg
gtgagattggatgctgatcacctgagatattttgacagtaataaggatgcctactctaag
cgcttcatctctgtggccgtcatctcccgtgtggctgccatcggggaccagaagtttgaa
gtgatcactaacaaccggacctttgctttccgggcagagagtgatgtggagcggcaggag
tggatgcaggccctgcagcaggcagtggctgagcagcgtgctcgggcccggctggctggt
gcttctctgttgggagttcgaggctcagagcagccagatcacgctggcagcctggagttg
cgtggctttaagaataagctgtatgtgaccgtggtcggtgacaaagtgcagctctataag
aatctggaggaataccacctgggcatcggcatcaccttcatcgacatgagtgtgggaaac
gtgaaggatgcggaccgtcgcagctttgacctcaccacaccctaccgcatcttcagtttc
ttggctgagtcggagctagagaaggagcagtggctggaggccatgcagggagccattgct
gaagctctctctacctcagaagtggccgagcgcatctggactgcagcccccaacaggttc
tgtgctgactgcggggctgcacagcccgactgggcctccatcaacctctgcgtcgtcatc
tgcaagcgctgtgcaggggagcaccggggcctgggcgctggagtctccaaggtgcggagc
ctgaagatggacaggaaggtgtggacagaaacactcatcgagctcttcttacagctgggc
aatggtgctgggaaccgcttctgggcagccaacgtgccccccagtgaggccttgcagcct
agcagcagccctgttgcccggcggcaccacctggaggccaagtacaaggagggcaaatac
cgccgctaccacccactctttggcaaccaggaggagctggacaaggccctgtgtgctgca
gtcaccacctcagacctggcagagacccaggcacttctgggctgcggggctggggtcaac
tgcttctcaggggacctgcaggccgcgactcccctggctctcgctgagcaggctggacag
acactgcagatggagttccttcgaaacaaccagaccatggaggtccctcgactggactcg
atgaagcccctggaaaagcactactcagttgtcctgccaactgtgagtcacagtggcttc
ctctacaagactgcttctgctggcaagctgcttcaggaccgccgtgcccgggaagagttt
agccgacgctggtgtgtccttagtgacggggtcctgagctactatgagaatgagcgcaca
gtgacacccaacggggagattcgggccagcgagattgtgtgccttgcagtgccccctcct
gacacccacggctttgagcacacgtttgaggtgtacacagagggagaacgtctgtacctg
tttggactggagagtgcagagctggctcatgagtgggtcaagtgtattgccaaggcattt
gtgcctcccctggctgaggagctgctgacccgggattttgagaggcttgggcgcctaccc
tacaaagctggtctgagcctccagcgtgcccaggaaggctggtttgccctcactggctct
gagctccgtgctgtctttccggaagggccctgcgaagagccactgcagctacggagactg
caggaactttccattcaaggagacagtgagaaccaggtgctggtactggtggagcgaaga
aggacgctgtacatccagggggagcgacgactggacttcatgggctggctgggggccatc
cagaaagcagcagccagcttgggggacacactgtctgagcagcagcttggggactcggac
atccctgtgattgtgtaccgctgtgtggactacatcacacagtgcggcttgacctctgag
ggcatctatcgaaagtgtgggcagacatcaaagacacagcggctcctggagagcctgcgg
caggacgcacgctcggtgcacctcaaggagggcgaacagcacgtggatgatgtctcctcc
gcgctcaaacgcttcttacgcgacctgccagatgggctcttcactcgtgcccaacgcctc
gcttggctggaggcgtcagagattgaggatgaggaagagaaaatctccaggtaccgagag
cttctggtgcatctgccccctgtcaaccgggccaccgtgaaggcccttatcagccacctg
tactgtgtccagtgcttctcagacacgaaccagatgaacacacacaacctggctattgtg
tttgggcccacgctcttccagacagatgggcaggactacaaggctggccgggtggtggaa
gaccttattagccactacgtggtggtgtttagtgtggatgaggaggagctaaggaagcag
cgggaggaggtcactgccattgtgaagatgcgagtggctggcactgccagtgggacccag
catgctggtgacttcatctgcacagtgtacctggaggaaaagaaggcagaaacagagcag
catgtcaagatccctgcatccatgacagctgaggagcttaccctggagatcctggaccgc
cggaatgtgggtatcagggagaaggactactggacttgctttgaggtcaatgagaaggag
gaggcagagcggcccctgcactttgctgaaaaggtgcttccaatcctgcacagtctgggc
acagacagccacctggtggtgaagaagcaccaggccatggaggccatgctcctgtacctg
gccagccgtgtgggtgacaccaagcatggcatgatgaagttccgtgaggaccgtagcctc
ctgggcctggggctgccatcaggtggcttccacgatcgctacttcatcctcaacagcagc
tgcctgcggctctacaaggaggtccggagccagaggtcgtggagcggggcccctgagacc
agtcaccggcctgagaaggaatggcctgtcaagagtcttaaagtctacctgggtgtgaag
aagaaactccggccacccacctgctgggggttcactgtggtgcatgagacagagaaacat
gagaagcagcagtggtacctctgctgtgacacacagatggagctccgggagtggtttgcc
accttcttttttgtgcagcacgatggtctggtatggccctcagagccctcacgtgtgtcc
cgggcagcccctgaggtccgactgggcagtgtatcactcatccccttgcgtggcagtgaa
aatgaaatgcgccggagtgtggcagccttcgctgcagaccccctttctctcctccgcaat
gtctga
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integrated database retrieval system
