Sciurus carolinensis (gray squirrel): 124958415
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Entry
124958415 CDS
T08117
Name
(RefSeq) syntaxin-5
KO
K08490
syntaxin 5
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
124958415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124958415
Membrane trafficking [BR:
ncar04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
124958415
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
DUF16
Apolipoprotein
Vac_Fusion
YwqH-like
MCPsignal
DUF5063
Motif
Other DBs
NCBI-GeneID:
124958415
NCBI-ProteinID:
XP_047372379
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Position
11:12286260..12309313
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AA seq
355 aa
AA seq
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MIPRKRYGSKNTDQGVYLGLSKTQVLSPATAGSSSSDIAPLPPPVVLVPPPPDTMSCRDR
TQEFLSACKSLQSRQNGIQTNKPALRAARQRSEFTLMAKRIGKDLSNTFAKLEKLTILAK
RKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDFVKAKGSQSGRHLQTHSNTIVVSLQ
SKLASMSNDFKSVLEVRTENLKQQRSRREQFSRAPVSALPLAPNHLGGGPVVLGAESHAS
RDVAIDMMDSRTSQQLQLIDEQDSYIQSRADTMQNIESTIVELGSIFQQLAHMVKEQEET
IQRIDENVLGAQLDVEAAHSEILKYFQSVTSNRWLMVKIFLILIVFFIIFVVFLA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgatcccgcggaaacgctacgggtctaagaacacggatcagggtgtctacctgggtctc
tcaaagacacaggtcctgtcccctgcaactgctggcagcagcagcagcgacatcgcccct
ctgcccccaccagtggtcctggtccctccccctcccgacaccatgtcttgccgggatcgg
acccaggagttcctgtctgcctgcaagtcgctgcagagccgtcagaatggaatccagaca
aataagccggctctgcgtgctgcccgacagcgcagtgaatttaccctcatggccaagcgc
attgggaaagacctcagcaacacatttgccaagctggagaagctgacaatcttggcaaag
cgcaagtccctttttgatgataaagcagtggaaattgaggagctaacatatatcatcaaa
caggacatcaatagcctcaacaaacaaatcgctcagcttcaggattttgtgaaggccaag
ggcagccagagtggccggcacctgcagacccattccaacaccattgtggtctccttgcag
tcaaaactggcttccatgtccaatgacttcaaatcagttttagaagtgaggacagagaac
ctgaagcagcaaaggagtcggcgggaacagttctcccgggcacctgtgtcagccctgccc
cttgcccccaaccacctggggggtggtcctgtagttttgggggcagagtctcatgcctcc
agggatgtggccattgacatgatggactcccggaccagccagcagctacagctcattgat
gagcaggattcctatatccagagtcgggcagataccatgcagaacatagagtctacaatt
gttgagctgggctccatctttcagcagttggcacacatggttaaggaacaggaggaaacc
attcagaggatcgacgagaacgtgctaggagcccagctggatgttgaggccgcccactca
gagatcctcaagtacttccagtcggtcacctccaaccggtggcttatggttaaaatcttc
ctcatcctcattgtcttcttcatcatcttcgtggtcttcctggcctga
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