KEGG   Sciurus carolinensis (gray squirrel): 124958446
Entry
124958446         CDS       T08117                                 
Name
(RefSeq) ras-related protein Rab-1B
  KO
K07875  Ras-related protein Rab-1B
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar05134  Legionellosis
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05134 Legionellosis
    124958446
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ncar04131]
    124958446
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ncar04147]
    124958446
   04031 GTP-binding proteins [BR:ncar04031]
    124958446
Membrane trafficking [BR:ncar04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Rab GTPases
    124958446
 Autophagy
  Other autophagy associated proteins
    124958446
Exosome [BR:ncar04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124958446
  Exosomal proteins of other body fluids (saliva and urine)
   124958446
  Exosomal proteins of colorectal cancer cells
   124958446
  Exosomal proteins of bladder cancer cells
   124958446
GTP-binding proteins [BR:ncar04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab1/35 [OT]
    124958446
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 RsgA_GTPase SRPRB Gtr1_RagA AAA FeoB_N ABC_tran AAA_7 AAA_22 AAA_29 Septin AAA_16 AAA_5 PduV-EutP LepB_N DUF815
Other DBs
NCBI-GeneID: 124958446
NCBI-ProteinID: XP_047372436
LinkDB
Position
11:complement(9496985..9504206)
AA seq 201 aa
MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG
NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASG
GERPNLKIDSTPVKPAGGGCC
NT seq 606 nt   +upstreamnt  +downstreamnt
atgaaccccgaatatgactacctgtttaagctacttttgattggtgactcgggcgtgggc
aagtcatgcctgctcctgcggtttgctgatgacacatacacagagagctacatcagcacc
atcggcgtggacttcaagattcgaaccattgagctggatggcaaaaccatcaaacttcag
atttgggacacggcgggtcaggaacgattccggaccatcacttccagctactatcggggg
gctcatggcatcatcgtggtgtatgacgtcaccgaccaggaatcctatgccaacgtgaag
cagtggctacaggagattgaccgctatgccagtgagaatgtcaataaactcctcgtgggc
aacaagagcgacctcaccaccaaaaaggtggtggacaacaccacagccaaggagtttgca
gactccctgggcatccccttcctggagacgagtgccaagaatgccaccaatgtggagcag
gcgttcatgaccatggctgctgagatcaaaaagcggatggggccaggcgcagcctcaggg
ggtgaaaggcccaacctcaagattgacagcacccctgtgaagccagctggtggtggctgt
tgctag

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