Sciurus carolinensis (gray squirrel): 124958451
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Entry
124958451 CDS
T08117
Name
(RefSeq) paired box protein Pax-7 isoform X1
KO
K09381
paired box protein 3/7
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
124958451
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124958451
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
124958451
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAX
Homeodomain
Pax7
Homeobox_KN
HTH_23
HTH_32
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
124958451
NCBI-ProteinID:
XP_047372439
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All DBs
Position
1:complement(196353446..196441736)
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AA seq
504 aa
AA seq
DB search
MAALPGAVPRMMRPAPGQNYPRTGFPLEVSTPLGQGRVNQLGGVFINGRPLPNHIRHKIV
EMAHHGIRPCVISRQLRVSHGCVSKILCRYQETGSIRPGAIGGSKPRQVATPDVEKKIEE
YKRENPGMFSWEIRDRLLKDGHCDRSTVPSGLVSSISRVLRIKFGKKEEEDEGDKKEDDG
EKKAKHSIDGILGDKGNRLDEGSDVESEPDLPLKRKQRRSRTTFTAEQLEELEKAFERTH
YPDIYTREELAQRTKLTEARVQVWFSNRRARWRKQAGANQLAAFNHLLPGGFPPTGMPTL
PPYQLPDSTYPTTTISQDGGSTVHRPQPLPPSTMHQGGLAAAAAADTSSAYGARHSFSSY
SDSFMNPGAPSNHMNPVSNGLSPQVMSILSNPSAVPPQPQADFSISPLHGGLDSASSISA
SCSQRADSIKPGDSLPTSQSYCPPTYSTTGYSVDPVAGYQYGQYGQTAVDYLAKNVSLST
QRRMKLGEHSAVLGLLPVETGQAY
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccttcccggcgcggtacccaggatgatgcgacccgctccggggcagaactat
ccccgcaccggcttccctctggaagtgtccaccccgcttggccaaggccgagtcaatcag
cttggtggggtcttcatcaacgggcgccccctgcctaaccacatccgccacaagattgtg
gagatggcccatcacggcatccggccctgtgtcatctcccgccagctgcgcgtctcccat
ggctgtgtctccaagattctctgccgctaccaggagaccgggtccatcaggcctggggcc
atcggcggcagcaagcccagacaggtggcgactccggatgtggagaaaaagatcgaggag
tacaagagggaaaacccgggcatgttcagctgggagatccgggaccggctgctgaaggac
gggcactgtgatcgcagcaccgtgccctcaggtttagtgagttcgattagccgcgtgctc
agaatcaagttcgggaagaaagaggaggaggacgaaggggacaagaaggaggacgatggc
gagaagaaggccaaacacagtatcgatggcattctgggcgacaaagggaaccggctggat
gagggctcggacgtggagtcggaacccgacctcccgctgaagcgcaagcagcggcgcagc
cggaccacgttcacggccgagcagctggaggagctggagaaggccttcgagaggacccac
taccccgacatctacacccgcgaggagctggcgcagaggaccaagctgacggaggcgcgc
gtgcaggtctggttcagcaaccgccgtgcccgttggcgtaaacaggcaggagccaaccag
ctggcagccttcaaccacctcctgccggggggcttcccgcccacgggcatgcccacgctg
cccccgtaccagctgccggactccacctaccccaccaccaccatctcccaagatgggggc
agcactgtgcaccggccccagcccctcccaccgtccaccatgcaccagggtggcctggct
gcggccgcagctgctgacaccagctctgcgtacggagcccgccacagcttctccagctac
tccgacagcttcatgaacccgggggccccctccaaccacatgaaccccgtcagcaacggc
ctgtctcctcaggtgatgagcatcctgagcaaccccagcgccgtgcctccgcagccgcag
gctgacttctccatctccccgctgcacggaggcctggactctgcctcctccatctcggcc
agctgcagccagcgggccgactccatcaagcccggagacagcctgcccacctcccagtcc
tactgcccacccacctacagcaccaccggctacagcgtggaccccgtggctggctaccag
tacggccagtacggccagactgctgttgattacctggccaaaaacgtgagcctgtccaca
cagcgtcgcatgaagcttggggagcactctgctgtgttgggactcctgcctgtggaaact
ggtcaagcctactag
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