Sciurus carolinensis (gray squirrel): 124958556
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Entry
124958556 CDS
T08117
Name
(RefSeq) doublecortin domain-containing protein 1-like isoform X1
KO
K23400
doublecortin domain-containing protein 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124958556
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
124958556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCX2_DCDC1
Ubiquitin_DCDC1
DCX
Ricin_B_lectin
DDA1
TPIP1
Motif
Other DBs
NCBI-GeneID:
124958556
NCBI-ProteinID:
XP_047372660
LinkDB
All DBs
Position
11:46228653..46723121
Genome browser
AA seq
1730 aa
AA seq
DB search
MEESQQSNPVGTLYGSTVNPIYKYILNDLPREFMSSQAKAVIKTTDDYLQPQFGLDRLLH
SAAVSEGSGLQDCSIHQTASDHSHEEISNPDSFKSNSKNNSCFMSASKRNRPVSAPMGQL
RVLKFSSLKFQSTQNWQRLSQRYKLQPRVIKVTAYKNGSRTVFAKVTAPTVTLLLEECTD
KLNLNMAARRVFLADGKEVLESEDIPHEADVYVSTGEPFSDPLKKLKVLDTCTMKMNLDS
PARYLYDMYGRKIEDISKVPLLEKCLQNSITPLRGPLWVSKGEGFSPSGAKMYIQGVLLA
LYQRLKSTKKYYKQLSLAFNDEKEKMTEKVILSMTAKEHHKAQEEVSRLIDELQTAIKSN
RGHLSKLGPQLQAEQEQFSSYVYQHIKSLPANTLVPGGLQLKVFENGKNTGGTSVYVSKK
DLGSNSPTQTGSMMERVMSSSSPLPTLHQLLLKIHQRLQGSSISPPGLNFSSARLYDEHG
QEIKNPLLLKNEQKIWVSYGKAFRSPQNPVLGLTFDRVTAFARGGITVAFKTFLDPNAVL
LPGCDNWDICEGFPINFNCTSEQIPDQFEKMDLENHFLQNKVDPNIVLHASVSVGKRSSS
SSEVSSRSQIAPSTLWPAASVWLITKTGMILSRAITQGCLAIGHPIRVKAATGTSLEGYK
LILQKRHKGDESQKWVFGTDGCIYSKAYPQFVLTYLEELNAQVDVTQTEYHIHHGAWTTA
QECGRNLAEEVLQKCASNSDLKQLPEPSDTHLMPEGSPEETGQLTVALVRKLEEKHPKAS
AQRWAIKHEGISKPGQWKHSRVENPLWNKLTYMWPVLPSGQLNEDFDWPIEGLLVPNSPP
MKKPIHKTPEQYVPMKLRVLRNGDKNKSRSLITICPEISSKTQNVNPERKEKICVAKNSE
MEINETEFHHFLERCTEILKLPSAARRLFNEKGKEIFSLKDLQRDELVYVSCGEQWINPD
QSIAQQKKQIFLRNLASDISKIQTFCSLRKEETLVLEVQSDIMSGSKLAVNKPRAIFGEE
KQVEEPEEQQKQNNALTTANASSEILDSHARAHLRMEACHTVVRYAWQDTSQDFDEDVSL
PKKMEELFENVKPQMKHSHSPKYGKLQKISRQQFEYRDGQIISYAAPQLVLGLQSSNLHS
GMEVILVEKKSDDNHQRWIHKEDSRTFHLASNPDLVLAVSMTKTRNEACGYPVIVQKYKP
YNNGTANQKWHYMENLKTFMAFYSTALNKEITLANFAGICTSSVIKRENIDQPGYYYLSA
GGKRKMMLCLACGQYLRAEKRLKQLLPGVPFLCASGSDTQKPLSQGPFKVISVAKADLSS
CEADKTLSYYEERLLSLRTKTCMQAVCHSGMAATHQTAVKIIAYRNGDGYRNGKLIVAGT
FPMLLTECTGQLGLSRSASKVYTRDGTTIFTLHDLVLWAVNESFMKRDSEEQKTGLTPVG
TEEITAKKNSRMKLRDKLLPGSVKSDSLDSIDKSLLTLILRNPVAVWVSCGEPFIPPNAL
QKAEKLEKQNWLKKDKILADLDTMKHKLRQLKGRRVAARQPATMVPTKSPVQPVVVEGGW
TEQTQEEIKLMELIRHTEAHLSEVQELQSKQNSPVATVRKAVQPSSLYKQPNTKRVWVYL
NGGRPEDGTYAWGRTITELLDDCSSHLKMTQPARTLYTPDGVLIQSWDDIERDMVICVST
GHGFITQKELKQVVEVRANYARIRRQQGPQATDLVVSPSMKLLSLVHLHN
NT seq
5193 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatcacaacaaagtaatcctgtaggcaccttgtatgggagtactgtgaaccca
atttacaaatatattttgaatgacttaccaagagaatttatgtcatcccaggcaaaagca
gttattaaaactactgatgattatttgcagcctcagtttggcctcgacagacttttgcat
tcagcagcagtatcagaagggtcaggacttcaagattgctctatacatcaaacagcatca
gatcacagccatgaggaaatatcaaacccagatagcttcaaatcaaacagtaaaaacaat
tcttgttttatgtcagcatccaagagaaacagacctgtcagtgctccaatgggtcaactg
agagttttaaagttctcctctctaaaatttcagtccactcagaattggcaaagattgtct
caaagatacaaacttcaaccaagagtaattaaagtaacagcttacaaaaatggatctaga
acagtctttgccaaagttactgctccaaccgtcaccttgctgctggaggagtgcacagac
aagctgaatctgaacatggccgcacgacgagtgttcttggcagacggcaaggaagtcctc
gaatctgaagatattccccatgaagctgatgtttatgtttcaacgggagagcccttttca
gatccactcaaaaaattaaaggttttagatacttgcacaatgaaaatgaatctagactca
ccagcaagatatctttatgatatgtatggcagaaaaattgaagatatttctaaagttcct
ctgcttgaaaaatgccttcaaaattccatcacacctttgcggggaccactttgggtctct
aagggagaaggtttcagcccctcaggagctaagatgtacatccaaggagttcttttggcc
ttgtaccaacgattaaagtctacaaaaaaatattataaacagttgagtttggccttcaat
gatgaaaaggagaaaatgacagaaaaagtcattctttcaatgacagcaaaggagcaccat
aaagcacaagaagaagtaagcaggctgattgatgaattgcagacagctatcaaaagcaac
agaggtcatctctctaaacttggcccccaattacaggctgagcaggagcaattctcctct
tatgtctaccaacacattaaaagccttccagcaaacactctggtcccaggaggcctgcag
ctcaaggtgttcgaaaatggtaaaaacactggaggaacctctgtttatgtcagtaaaaaa
gatttaggctccaatagcccaactcagactggcagtatgatggaaagagttatgtcttct
tcatcccccttacccaccctccaccagttacttctcaagattcatcagaggcttcaaggt
tcttccatcagcccaccaggcctcaatttttcttcagcccggctatatgatgagcatggt
caagaaattaagaatccacttttgctgaagaatgagcaaaaaatctgggtctcttatggt
aaagcattcagatctccacaaaaccctgttttgggtttgacctttgaccgagtgacggca
tttgccagaggtggcatcacagttgccttcaagacctttttggatcctaatgctgttctg
ctacctggatgtgataattgggacatttgtgagggatttccaattaatttcaactgtacc
agtgaacagatacctgatcaatttgaaaagatggacttggagaaccatttcctacagaac
aaggtggatcccaatattgtccttcatgcctctgtttccgttggaaagcgaagttcctca
agtagtgaagtgagcagcaggagtcagatagctccgtcaaccctgtggcctgcagccagt
gtgtggctgatcaccaagactggaatgatcctgagccgagcgataactcagggctgccta
gctattggtcatccaatcagagtcaaggctgcgacgggaacatcactagaaggatataaa
ttaatcctacagaaaagacataaaggagatgaatctcagaagtgggtgtttggaactgat
ggctgtatttattctaaggcttatcctcaatttgttctgacctatctggaggagctaaat
gcacaagtggatgtgactcaaacagagtatcacattcaccatggtgcctggaccacagct
caagaatgtggcagaaatttagcagaagaggttctgcaaaaatgtgccagcaactctgat
ctgaagcaactgccagaaccctcagacacccatttaatgccagaaggttctcctgaggag
acggggcagctgacagtggcactggtgaggaaactggaggagaaacatcctaaggcttcc
gctcagaggtgggccataaaacacgaagggatcagtaagccaggccaatggaagcattcc
agagtggaaaaccctctatggaacaagcttacttacatgtggccagtccttcccagcgga
caacttaatgaggactttgattggccaatagaaggactgcttgttcccaacagccctcct
atgaagaaacccatccataagacaccagagcagtatgtccctatgaaactcagagttttg
agaaatggagacaagaataaaagcagatcccttattaccatttgtccagaaatctcatct
aaaacacaaaatgttaatcctgaaaggaaagagaaaatctgtgttgctaagaattctgag
atggaaataaatgagactgaatttcatcattttttggagaggtgcactgaaattttaaag
ttaccttctgcagctaggagattgttcaatgaaaaggggaaggaaatcttttccctaaag
gacctgcaaagagatgaactggtgtatgtttcatgtggagaacagtggatcaatcctgac
cagtccattgctcagcaaaagaagcagatattcctcaggaacctagcatctgacatttcc
aaaattcaaaccttctgcagtcttcgtaaggaagaaactcttgttttagaagtccaaagt
gacatcatgtctggaagcaagcttgctgtgaataaacctagagcaatttttggagaagag
aagcaagttgaagaaccagaggaacagcaaaagcaaaataatgctttaacaacagctaat
gcttccagtgaaatcctagattcacatgcaagagcccacctccgaatggaagcttgtcac
acagttgtcagatatgcctggcaggatacttcacaggactttgatgaggacgtcagtctt
ccaaagaaaatggaagaactctttgaaaatgtgaaaccgcaaatgaaacacagccattct
ccaaagtatggtaaattgcagaagatttctcgtcagcagtttgaatacagagatgggcag
attataagctatgctgctcctcagcttgttttggggttacaaagctccaacctccattca
ggtatggaggtcattttggtggagaaaaaatctgatgataatcatcaacgctggatacac
aaggaggacagcaggacctttcacctggcgagtaacccagaccttgtgctggcagtgtct
atgaccaagactagaaatgaagcctgtggctatccagttattgttcagaaatataagcca
tataacaatggaactgccaatcaaaagtggcactacatggaaaatttgaaaacatttatg
gccttttatagcactgccttgaataaggaaatcacattggcaaattttgctggtatttgt
acatcttctgtcattaaaagggaaaacattgatcaaccaggatactattatctctcagct
ggtggaaagaggaaaatgatgctctgcctggcctgtggacaatacctaagagcagagaag
agactgaaacagttgcttccaggggttccattcctctgtgcttcaggctccgacacccag
aaacccttatcacaagggcctttcaaggtcatcagtgtggccaaggctgacttatcatct
tgtgaggctgacaaaactctaagttattatgaagaacgcctattatctttacggacgaag
acctgtatgcaagctgtgtgtcacagtggtatggcagcgacacaccagacggcagtgaaa
ataatcgcatacagaaatggggatggatatcgtaatgggaagttaattgtggctggaaca
ttccccatgcttcttacagaatgcacaggacagcttgggctttccagatcagcttccaaa
gtatataccagagatggaaccacaatctttaccttgcatgatttggttttatgggctgta
aatgaatcatttatgaagagagactctgaagaacaaaagacaggcttaactcctgttgga
acagaagagatcactgccaaaaaaaactctagaatgaaattgagagacaaattgcttcct
ggctctgtgaaatctgatagtttggatagtatagataagtctttgctcaccctcatcctc
agaaatcctgttgctgtctgggtatcttgtggtgaaccatttatacctccaaatgctttg
cagaaagcagaaaaattagagaagcagaactggctaaaaaaagacaaaattttggctgat
ttagataccatgaaacacaaactgagacagttaaaagggcggcgagtagcagcacgtcag
ccagccaccatggttcccaccaaaagccctgtgcagccggtagtagttgaaggaggctgg
actgagcagactcaagaggaaattaaactcatggaacttataagacatacagaggcacat
ctttctgaagttcaagaactgcaatccaaacagaattccccagttgcaactgtacgtaaa
gcagttcagcctagtagcctgtataagcaacccaacacaaaacgagtctgggtttattta
aatggaggaagacctgaagatggcacttatgcgtggggcaggactattacagagctgcta
gatgactgttcatctcatctcaaaatgacccagccagccagaaccctgtacaccccagat
ggagtgttgattcagtcatgggatgacatagaacgagacatggtcatctgtgtgtctaca
ggacatggcttcataactcagaaagagttgaagcaagtggtggaggtcagagcaaattac
gccagaattcgaaggcagcagggccctcaagccacagaccttgtggtgtcaccatctatg
aagctgctgtcactggtacatctgcacaattaa
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integrated database retrieval system
