Sciurus carolinensis (gray squirrel): 124958588
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Entry
124958588 CDS
T08117
Name
(RefSeq) cysteine--tRNA ligase, cytoplasmic isoform X1
KO
K01883
cysteinyl-tRNA synthetase [EC:
6.1.1.16
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124958588
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ncar01007
]
124958588
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ncar03016
]
124958588
Enzymes [BR:
ncar01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.16 cysteine---tRNA ligase
124958588
Amino acid related enzymes [BR:
ncar01007
]
Aminoacyl-tRNA synthetase
Class I (G)
124958588
Transfer RNA biogenesis [BR:
ncar03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
124958588
Prokaryotic type
124958588
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1e
tRNA-synt_1g
Arc1p_N_like
tRNA-synt_1
Motif
Other DBs
NCBI-GeneID:
124958588
NCBI-ProteinID:
XP_047372748
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All DBs
Position
11:complement(5793312..5856576)
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AA seq
831 aa
AA seq
DB search
MAGSSGEQAADYRSILSISDEAARARALDEHLSTRSYVQGYTLSQADVDVFRQLSALPAD
SRLFHVTRWFRHIEALLGGPCDKGKACGPQASKSRRVQPQWSPPAGTEPCKLRLYNSLTR
KKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKDYFQYDVFYCMNITD
IDDKIIRRARQNFLFEQYREQKPAATQLLEDVHAALKPFSIKLSETTDPGKRQMLERMQH
MVELAIEPLEEAVRASLSGEDIASHVETLLDKAEDLLSDWLDSTRGGEVTDNSIFSQLPK
FWEGEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGYASNGSVYFDTLKFAS
SEKHSYGKLVPEAVGDQAALQEGEGDLSISADRLSEKRSPNDFALWKASKPGEPSWPCPW
GKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSEAYFENDCWVRYFLHT
GHLTIAGCKMSKSLKNFVTIKDALKKHSARQLRLAFLMHSWKDTLDYSSNTMESALQYEK
FMNEFFLNVKDVLRAPVDITGQFEKWEDEEAELNKNFYDKKRAVHEALCDNVDTRTVMEE
MRALVSQCNLYMAARKATRRRPNRALLESIAVYLTHMLKIFGAIEEESSLGFPVGGPKNN
LNLEATVMPYLQVLSEFREGVRKIAREKKVPEVLQLSDALRDDILPELGVRFEDHEGLPT
VVKLVDRATLIREREEKKRVEEEKRRKKEEAARRKQEQEAAKLARMKIPPSEMFLSESDK
YSKFDENGLPTHDAEGQELSKGLAKRLRKLYEAQEKLHQEYLQKVQNGSLQ
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggcaggttcttccggagagcaggctgctgactacaggtccattctgagcattagtgac
gaggcagccagggcacgggccctggacgagcacctcagcacgcgtagctatgtccagggg
tacacactgtcccaggcagatgtggatgtgttcaggcagctctcggccctgcccgctgac
tcgaggctcttccacgtgactcggtggttcaggcacatagaagcgctcctgggtggccct
tgtgacaagggcaaggcctgtgggccccaagcaagtaaaagccggcgagtgcagcctcag
tggtcccctccagctgggactgagccgtgcaagcttcgcctgtacaacagcctcacccgg
aaaaaggacgtgttcatacctcaagatgggaaaaaggtgacctggtactgctgcgggccc
actgtctatgatgcatcgcacatggggcatgccaggtcctacatttctttcgacatcctg
agaagagtgttgaaggattacttccagtatgacgtcttctactgcatgaacatcacagac
attgatgacaagatcatcaggagggcccggcagaacttcttgtttgagcagtatcgggag
cagaaaccagcagccacccaactcctggaggacgttcatgctgctctgaagccattttca
ataaagttaagtgagaccacagatcctggcaagaggcagatgcttgagcgaatgcagcac
atggtggagctggccatagagccacttgaggaagctgtgcgcgccagcctctctggagaa
gacatcgccagccatgttgagacgttgctggacaaggcagaggacttgctttctgactgg
ttggactccacgcgtggcggtgaggtgaccgacaattccattttctcccagctgcccaag
ttctgggaaggggagttccacaaggacatggaagctctgaacgttctgcctccagatgtc
ctgacccgggttagcgagtatgtaccggaaattgtgaactttgtccagaagattgtggac
aatggctatggatatgcttcaaatgggtctgtctactttgacaccctgaagtttgcttcc
agtgagaaacactcctatggcaagctggtgcccgaagccgttggggaccaggcagctctg
caggagggggaaggcgacctgagcatctcggcagaccgcctgagtgagaaacggtctccc
aacgacttcgccctgtggaaggcctccaagccaggagagccgtcctggccatgcccctgg
gggaagggtcgtcccggatggcacatcgagtgctccgccatggcaggcacgcttctggga
gcctcaatggacattcacggaggagggtttgacctccggttcccccaccatgacaacgag
ctggcgcagtcagaggcctactttgaaaacgactgctgggtcaggtacttcctccacaca
ggccacctgacgatcgcaggctgcaagatgtcaaagtctctaaagaacttcgtcaccatc
aaggacgccttgaagaagcactcagcacggcagttgcggctggccttcctcatgcactcc
tggaaggacacgctggattattccagcaataccatggagtcggcgctgcaatatgagaag
ttcatgaacgagtttttcttaaatgtgaaagatgtccttcgagctcctgttgacatcacc
ggccagtttgaaaagtgggaagatgaagaagcagaactcaataagaacttttatgacaag
aaaagggcagttcatgaagccctctgtgacaatgttgacacccgcaccgtcatggaagag
atgcgggccctggtcagtcagtgcaacctctatatggcggcccggaaggctacaaggcgg
aggcccaaccgggctttgctggagagtatcgctgtgtacctcacccacatgctgaagatc
tttggggccatagaagaggaaagctccctgggtttcccagtcggagggcctaagaacaac
ctaaatctcgaggccaccgtcatgccctacctgcaggtgttgtcggaattcagagaaggc
gtgcggaagatcgcccgggagaagaaagtccctgaggttctacagctcagcgatgccctc
cgggatgacatcctgccggaactcggggtgcggtttgaagatcacgaaggactgccgaca
gtggtgaaactggtggacagagctaccttgataagagagagggaagagaagaaaagggtg
gaagaagagaagaggaggaagaaggaggaggctgccaggagaaaacaagagcaggaagcg
gcaaagctggccaggatgaagattccacccagtgagatgttcctgtcagaaagtgacaaa
tactccaagtttgatgaaaatggcctgcccacgcatgacgctgagggccaggagctgagc
aaggggcttgccaagaggctgaggaagctctacgaagcccaggagaagctgcaccaggag
tacctgcagaaggttcagaacggaagtctgcagtga
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