Sciurus carolinensis (gray squirrel): 124958591
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Entry
124958591 CDS
T08117
Name
(RefSeq) BRCA2-interacting transcriptional repressor EMSY isoform X1
KO
K25790
BRCA2-interacting transcriptional repressor EMSY
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124958591
03400 DNA repair and recombination proteins [BR:
ncar03400
]
124958591
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Other HDAC associated proteins
124958591
DNA repair and recombination proteins [BR:
ncar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
124958591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ENT
Motif
Other DBs
NCBI-GeneID:
124958591
NCBI-ProteinID:
XP_047372754
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All DBs
Position
11:78696662..78770727
Genome browser
AA seq
1302 aa
AA seq
DB search
MPVVWPTLLDLSRDECKRILRKLELEAYAGVISALRAQGDLTKEKKDLLGELSKVLSIST
ERHRAEVRRAVNDERLTTIAHKMNLSLYLGERPSYSMSGPNSSSEWSIEGRRLVPLMPRL
VPQTAFTVTANAVANAAIQHNASLPVPAETGSKEGVSCSDEDEKPRKRRRTNSSSSSPVV
LKEVPKAVVPVSKTITVPVSGSPKMSNIMQSIANSLPPHMSPVKITFTKPSTQTTNTTTQ
KVIIVTTSPSSTFVPNILSKSHNYAAVTKLVPTSVIASTTQKPPVVITASQSSLVSSSSS
GSSSSTPSPIPNTVAVTAVVSSTPSVVMSTVAQGVSTSAIKMASTRLPSPKSLVSAPTQI
LAQFPKQHQQSPKQQLHQVQQQTQQQVAQPSPVSHQQQPQQSPLPPGIKPTIQIKQESGV
KIITQQVQPSKILPKPVTATLPTSSNSPIMVVSSNGAIMTTKLVTTPTGTQATYTRPTVS
PSIGRMAATPGAATYVKTTSGSIITVVPKSLATLGGKIISSNIVSGTTTKITTIPMTSKP
NVIVVQKTTGKGTTIQGLPGKNVVTTLLNAGGEKTIQTVPTGAKPAIITATRPITKMIVT
QPKGIGSTVQPAAKIIPTKIVYGQQGKTQVLIKPKPVTFQATVVSEQTRQLVTETLQQAS
RVAEAGNSSIQEGKEEPQSYTDSSSSSTESSQSSQDSQPVVHVIASRRQDWSEHEIAMET
SPTIIYQDVSSESQSATSTIKALLELQQTTVKEKLESKPRQPTIDLSQMAVPIQMTQEKR
HSPESPSIAVVESELVAEYITTERTDEGTEVAFPLLDAVVISGEISSPPLFSVSHRSQPQ
QPSQPQRTLLQHVAQSQTATQTSVVVKSIPASSPGAITHIMQQALSSHTAFTKHSEELGT
EEGEVEEMDTLDPQTGLFYRSALTQSQSAKQQKLSQSQLEQTQLQVKTLQCFQTKQKQTI
HLQADQLQHKLPQMPQLSIRHQKLTPLQQEQAQPKPDVQHTQHPMVAKDRQLPTLMAQPP
QTVVQVLAVKTTQQLPKLQQAPNQPKIYVQPQTPQSQMSLPASSEKQPASQVEQPIITQG
SSVTKITFEGRQPPTVTKITGGSSVPKLTSPVTSISPIQASEKTAVSDILKMSLMEAQID
TNVEHMVVDPPKKALTTSMLTGEAGSLPSTHMVVAGMANSTPQQQKCRESCSSPSAVGPP
LTARKIDAPGVPTAGQFMRIQNIGQKKAEESPAEIIIQAIPQYAIPCHSSSNVVVEPSGL
LELNNFTSQQLDDDETAMEQDIDSSTEDGTEPSPSQSSAERS
NT seq
3909 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttgtgtggccaacccttttggatctcagcagggatgaatgcaaaaggattctt
cgaaaattggaattggaggcatatgccggagttatcagtgcacttcgggcacagggggat
ctcaccaaggaaaagaaagatcttcttggagaactctcaaaagttcttagcatctcaaca
gaacgtcatcgtgctgaagttcggagagcagtaaacgatgaacggttaacaacaattgca
cataaaatgaatttatccttatatttgggtgaaagaccaagttacagtatgtctggacct
aatagctcctcagaatggtccattgaaggtcgtcggttggtaccattgatgccccggcta
gttccccaaaccgccttcactgtaacagctaatgctgttgcgaatgcagctatccagcac
aatgcatcccttccagtgcctgcagaaacaggaagcaaagaaggtgttagctgttcagat
gaagatgaaaaacccagaaaacgaaggcgaacaaactcctctagctcctctcctgttgtc
ctaaaggaagttccaaaggctgttgttccagtctcaaagaccatcaccgtgcctgtgagt
ggtagtcccaagatgagcaacatcatgcaaagtattgccaactccttaccaccccacatg
tctcctgtgaaaataaccttcaccaaaccatcaacacaaacgacaaacacaacaacacag
aaggtaattatagtgaccacatcaccaagttcaaccttcgtgcccaacattctctccaaa
tcccataattatgcagcagttactaagcttgtaccaacatcagtcattgcttccacaact
cagaagccaccggttgttataactgcttcacagtcctctctggtcagtagtagcagcagt
ggcagcagcagttctacgccatcacctattcctaatacagttgcagtaacagctgtggta
tcctctacaccatctgtagtcatgtcaacagtagcacaaggtgtatctacatcagcaatc
aaaatggcatcaacaagacttccttcccccaaaagcttagtgagtgctccaacccagatt
cttgcacagtttcctaaacagcatcaacaatctcctaagcagcagttacatcaagtgcaa
caacagacacagcaacaagtggcccagccttctccagtatctcatcaacaacagcctcag
cagtcccctttgccacctggtatcaaacctaccatccaaatcaaacaggagtcaggtgtt
aaaatcatcacacaacaggtccaaccaagtaaaatcttacccaaaccagtgactgcaact
cttcccaccagtagcaattcccctattatggtggttagcagtaatggtgcaattatgaca
actaaactggtaaccactcctacaggtacacaggcaacctatacccggccaacagtgagc
ccatccataggtcggatggctgcaacccctggagctgcaacctatgtgaaaactaccagt
ggtagcatcattacagtagtacccaaatcattagctactttggggggcaagataattagc
agtaatatagtttctggaacaactaccaaaatcactacaatcccaatgacttccaagcct
aatgtgattgttgtgcaaaagacgacaggaaaaggaacgaccattcaaggcctccctggc
aaaaatgttgtcacaacattactaaatgctggaggagaaaagacaattcagacagtgcca
acaggagcaaagccagctatcatcactgctacaagacccatcaccaaaatgattgtaact
cagccaaaaggaataggttccacagttcaaccagcagctaaaattatcccaacaaaaatt
gtttatgggcagcaagggaaaacacaggttcttattaaacccaaaccagtaacatttcaa
gccacagttgttagtgaacaaacaagacaactggtaacagaaacattacagcaagcatcc
agggtagcagaggctggtaattcatctattcaggaaggaaaagaagaaccacagagttat
acagatagtagttcctcttccacagagtcctctcaaagttcccaagattcccagcctgta
gttcatgtaattgcttcccggcgtcaggattggtcagagcatgagattgcaatggagact
agccccaccataatatatcaggatgtatccagtgaatcacaatcagctacttcaacaatc
aaagctcttttagaactccaacagacaacagtaaaggaaaaattggaatctaaaccaaga
caacccactattgacttgagtcaaatggcagtgcctattcagatgacccaggaaaagaga
cattctcctgagagtccatcaattgctgtggtagagtcagaactagttgctgaatacatc
actactgaacgcactgatgagggaacagaggttgcttttccccttctagatgctgtggtg
atttctggagaaatatcatcacctcctctattttcagtcagccatcgatcccagccccaa
cagccctcccagccccagcggaccctgctccaacatgtcgctcagtcacagactgcaacg
cagacttcggtggtggtgaagtccatcccagcatcttccccaggagcaatcactcacatt
atgcagcaggcattaagcagtcacactgcttttaccaaacacagcgaggaacttggaact
gaggagggcgaggttgaagaaatggacactttagaccctcagacaggtctgttttaccga
tctgccctgactcagtcacagtcagctaaacagcagaaacttagccagtcccagctggaa
cagactcagctgcaagtgaaaactctgcagtgcttccagactaaacagaagcagaccatc
cacctgcaggcagaccagctccagcacaaactcccgcaaatgccccagctttccatcagg
catcaaaaactcacccctctccagcaagaacaagcacagcccaagccagatgtacagcac
acacagcatcccatggtggccaaagacaggcagcttcctactttaatggcacagcccccg
caaactgtagtacaggtgcttgcagtgaaaaccacgcagcagctccctaaactgcagcag
gctccgaaccaaccaaaaatctacgtgcaaccccaaaccccccagagccaaatgtcgctc
cctgcctcgtcagagaaacagccggcaagccaggtggagcagccaattataactcaagga
tcctctgttacaaagataacttttgaggggcgccagcctcccacagttacaaagataact
ggtggcagttctgtgcctaagctgacatcaccagttacaagcatatctcccattcaggcc
tctgagaagacagcagtgtcagacattttgaaaatgtctttgatggaagctcagattgat
acaaatgtagagcatatggtagtggatcccccaaagaaggctcttaccactagtatgctc
actggtgaagcaggatcattaccctccacccacatggtggtggcagggatggcgaattcc
actccccagcaacagaaatgtagagagtcctgttcaagtccatctgctgttggccctccc
ctaacggccaggaaaatcgatgcaccaggagtgcctacggcaggccaattcatgcgtatt
cagaatataggccaaaagaaagctgaagagagcccagcagaaattatcatccaggccatt
ccccagtatgctattccttgccactccagctccaacgtggtcgtggagcccagtgggctt
ctggagctaaacaacttcaccagtcagcagctggatgatgatgagacagcaatggagcag
gacatagacagtagcacggaggatggaaccgagcccagcccctctcagagttctgccgaa
cggtcctag
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