Sciurus carolinensis (gray squirrel): 124958602
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Entry
124958602 CDS
T08117
Name
(RefSeq) metabotropic glutamate receptor 5 isoform X1
KO
K04604
metabotropic glutamate receptor 5
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04020
Calcium signaling pathway
ncar04072
Phospholipase D signaling pathway
ncar04080
Neuroactive ligand-receptor interaction
ncar04082
Neuroactive ligand signaling
ncar04540
Gap junction
ncar04720
Long-term potentiation
ncar04723
Retrograde endocannabinoid signaling
ncar04724
Glutamatergic synapse
ncar05010
Alzheimer disease
ncar05016
Huntington disease
ncar05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
124958602
04072 Phospholipase D signaling pathway
124958602
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124958602
04082 Neuroactive ligand signaling
124958602
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
124958602
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
124958602
04720 Long-term potentiation
124958602
04723 Retrograde endocannabinoid signaling
124958602
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
124958602
05016 Huntington disease
124958602
05022 Pathways of neurodegeneration - multiple diseases
124958602
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ncar04030
]
124958602
G protein-coupled receptors [BR:
ncar04030
]
Metabotropic glutamate receptor family
Glutamate (metabotropic)
124958602
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
7tm_3
GluR_Homer-bdg
NCD3G
Peripla_BP_6
DUF5438
Motif
Other DBs
NCBI-GeneID:
124958602
NCBI-ProteinID:
XP_047372787
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All DBs
Position
11:complement(90037859..90500478)
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AA seq
1178 aa
AA seq
DB search
MVLLLILSVLLLKEDVRGSAQSSERRVVAHMPGDIIIGALFSVHHQPTVDKVHERKCGAV
REQYGIQRVEAMLHTLERINSDPTLLPNITLGCEIRDSCWHSAVALEQSIEFIRDSLISS
EEEEGLVRCVDGSSSSFRSKKPIVGVIGPGSSSVAIQVQNLLQLFNIPQIAYSATSMDLS
DKTLFKYFMRVVPSDAQQARAMVDIVKRYNWTYVSAVHTEGNYGESGMEAFKDMSAKEGI
CIAHSYKIYSNAGEQSFDKLLKKLRSHLPKARVVACFCEGMTVRGLLMAMRRLGLAGEFL
LLGSDGWADRYDVTDGYQREAVGGITIKLQSPDVKWFDDYYLKLRPETNLRNPWFQEFWQ
HRFQCRLEGFAQENSKYNKTCNSSLTLRTHHVQDSKMGFVINAIYSMAYGLHNMQMSLCP
GYAGLCDAMKPIDGRKLLDSLMKTNFTGVSGDMILFDENGDSPGRYEIMNFKEMGKDYFD
YINVGSWDNGELKMDDDEVWTKKNNIIRSVCSEPCEKGQIKVIRKGEVSCCWTCTPCKEN
EYVFDEYTCKACQLGSWPTDDLTGCDLIPVQYLRWGDPEPIAAVVFACLGLLATLFVTVV
FIIYRDTPVVKSSSRELCYIILAGICLGYLCTFCLIAKPKQIYCYLQRIGIGLSPAMSYS
ALVTKTNRIARILAGSKKKICTKKPRFMSACAQLVIAFILICIQLGIIVALFIMEPPDIM
HDYPSIREVYLICNTTNLGVVTPLGYNGLLILSCTFYAFKTRNVPANFNEAKYIAFTMYT
TCIIWLAFVPIYFGSNYKIITMCFSVSLSATVALGCMFVPKVYIILAKPERNVRSAFTTS
TVVRMHVGDGKSSSAASRSSSLVNLWKRRGSSGETLSSNGKSVTWAQNEKSRGQHLWQRL
SVHINKKENPNQTAVIKPFPKSTESRGLGTGVGGASPGASGGLGGASCASASPAGPEPPD
AGAKALYDVAEAEEQFPAPARPRSPSPISTLSHRAGSASRTEDDVPSLHSEPAARSSSSQ
GSLMEQISSVVTRFTANISELNSMMLSTAAPGPGVGAPLCSSYLIPKEIQLPTTMTTFAE
IQPLPAIEVTGGTQPAAGASPAGGATPETPAAGPEAAAGKPDLEELVALTPPSPFRDSVD
SGSTTPNSPVSESALCIPSSPKYDTLIIRDYTQSSSSL
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggtccttctgttgatcctgtcagtcctgcttttgaaagaagatgtccgtgggagcgca
cagtccagtgagaggagggtggtggctcacatgccaggcgacatcattattggagctctt
ttttctgtccaccatcagcctactgtggacaaagttcatgagaggaagtgtggggcagtc
cgtgaacagtatggcattcagagagtggaggccatgctgcacaccttggaaagaatcaat
tcagaccccacactcttgcccaacatcacacttggctgtgaaataagggattcctgctgg
cattcagctgtggccctagagcagagcattgagtttataagagattccctcatttcttca
gaagaggaagagggcttggtacgctgtgtggatggctcttcctcttctttccgctccaag
aagcccatagtaggggtcattgggcctggctccagttctgtggccattcaagtccagaac
ttgctccaacttttcaacatacctcagattgcttactcagcaaccagcatggatctgagt
gacaagactttgttcaagtacttcatgagagttgtgccttcagatgcccagcaggcacga
gccatggtggacatagtgaagagatacaactggacctatgtatcagcggtgcacacagaa
ggcaactatggtgaaagtggaatggaagccttcaaagatatgtcagccaaggaagggatt
tgcattgcccactcttataaaatctacagcaatgctggggagcagagcttcgacaagttg
ctgaaaaaactcagaagtcacttgcccaaggcacgggtggtggcctgcttctgtgagggc
atgacagtgagaggtctgctgatggctatgagacgcctgggtcttgcaggagaatttctg
cttctgggcagtgatggctgggctgataggtacgatgtgacagatggatatcagcgagaa
gctgttggtggaatcacaatcaagctccaatctcctgatgtcaagtggtttgatgattat
tatctgaagctccggccagaaacaaacctccgaaacccttggtttcaagaattttggcag
catcgttttcagtgccgactggaaggatttgcgcaggagaacagcaaatacaacaagact
tgcaatagttctctgaccctgagaacacatcatgttcaagattccaaaatgggatttgtg
atcaacgccatctattccatggcctatgggctccacaacatgcagatgtccctttgccca
ggctatgcaggactctgtgatgcaatgaagccaattgatgggcggaaacttttggactcc
ctgatgaaaaccaactttactggggtttctggagatatgatcctatttgatgagaatgga
gactctccaggaaggtatgaaataatgaatttcaaggaaatgggaaaagattacttcgat
tatatcaatgttggaagttgggacaatggagaactaaaaatggatgatgatgaagtatgg
accaagaaaaataacatcatcagatctgtgtgcagtgaaccatgtgagaaaggccagata
aaggtgatccggaagggagaagtcagctgttgttggacctgcacaccttgtaaggagaat
gagtacgtctttgatgagtacacctgcaaagcatgccagctgggttcctggcccactgat
gacctgacaggttgtgatttgatccccgtacagtatcttcgctggggtgaccctgagcca
attgcagctgtggtgtttgcctgcctcggcttgctggccaccctgtttgttactgtagtc
ttcatcatttatcgtgatactccggtagtcaagtcctccagcagggaactctgctatatt
atccttgctggtatctgcctgggttacttatgtaccttctgcctcattgcaaagcccaaa
cagatttattgctatcttcagagaattgggattggtctgtctccagccatgagctattca
gccctagtaaccaagaccaaccgcattgcaagaatcctggctggcagcaagaagaagatc
tgtaccaaaaagcccagatttatgagtgcctgtgcccagttggtgattgctttcattctc
atatgtatccagttgggcattattgtggcccttttcataatggagcctcctgacataatg
catgactatccaagtattcgagaagtctacctaatttgtaacaccaccaacctgggagtt
gtcactcctcttggatacaatggattgttgattttgagctgtaccttctatgcattcaag
accaggaatgttccggctaacttcaacgaggccaagtatatcgccttcacaatgtacacc
acctgcattatatggctggcctttgtgccgatctactttggcagcaactacaaaatcatc
accatgtgtttctcggtcagcctcagtgccacagtggctctaggctgcatgtttgtgccg
aaggtgtacatcattctggccaaaccggagagaaatgtgcgaagcgccttcaccacgtct
accgtggtgcgcatgcacgtaggggatggcaagtcatcctctgcagccagcagatccagc
agcctagtcaacctgtggaagaggaggggctcctctggggaaaccctaagttctaatgga
aaatccgtcacgtgggcccagaacgagaagagtaggggacagcatctgtggcagcggctg
tcggtccacatcaacaagaaagagaaccccaaccaaacagccgtcatcaagcccttcccc
aagagcaccgagagccgcgggctgggtacgggcgtggggggcgcgagtcccggggcctcc
ggaggcttgggcggcgcgagctgcgccagcgctagcccggcagggcccgagccccccgac
gcgggcgccaaggcgctgtacgacgtggcggaggcggaggagcagttccctgcgcccgcg
cggcctcgctcgccttcgcccatcagcactctgagccaccgtgcgggctccgccagccgc
acggaggacgacgtgccctcgctgcactcggaacccgcggcgcgcagcagctcctcgcag
ggctcgctcatggagcagatcagcagcgtggtaactcgcttcaccgccaacatcagcgag
ctcaactccatgatgctgtccaccgctgctcctggccccggcgtgggcgcccctctctgc
tcctcctacctgatccccaaagagatccagctgcccacgaccatgaccacgttcgccgaa
attcagcctctgcctgcgatagaggtcacgggtggcacacagcccgccgccggagcctcg
ccggctgggggcgctaccccggagaccccagcggctggtccggaggcggcggccggcaag
ccggacctggaggagctggtggctctcaccccgccgtcccccttcagagactcggtggac
tcggggagtacgacccccaactctccagtgtcggagtcggccctctgtatcccatcgtct
cccaaatatgacactcttatcataagagattacactcagagttcctcgtcgttgtga
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