KEGG   Sciurus carolinensis (gray squirrel): 124958642
Entry
124958642         CDS       T08117                                 
Name
(RefSeq) flap endonuclease 1
  KO
K04799  flap endonuclease-1 [EC:3.1.-.-]
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar03030  DNA replication
ncar03410  Base excision repair
ncar03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124958642
   03410 Base excision repair
    124958642
   03450 Non-homologous end-joining
    124958642
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ncar03032]
    124958642
   03400 DNA repair and recombination proteins [BR:ncar03400]
    124958642
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ncar04147]
    124958642
DNA replication proteins [BR:ncar03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    124958642
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     124958642
DNA repair and recombination proteins [BR:ncar03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     124958642
Exosome [BR:ncar04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   124958642
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc XPG_I_2 5_3_exonuc_N HHH_5
Other DBs
NCBI-GeneID: 124958642
NCBI-ProteinID: XP_047372886
LinkDB
Position
11:complement(13286701..13290983)
AA seq 380 aa
MGIQGLAKLIADVAPSAIRENDIKSYFGRKVAIDASMSIYQFLIAVRQGGDVLQNEEGET
TSHLMGMFYRTIRMMENGIKPVYVFDGKPPQLKSGELAKRSERRAEAEKQLQEAQAAGAE
EEVEKFTKRLVKVTKQHNDECKHLLSLMGIPFLDAPSEAEASCAALVKAGKVYAAATEDM
DCLTFGSPVLMRHLTASEAKKLPIQEFHLSRILQELGLNQEQFVDLCILLGSDYCESIRG
IGPKRAVDLIQKHKSIEEIVRRLDPNKYPVPENWLHKEAQQLFLEPEVLDPESVELKWSE
PNEEELVKFMCGEKQFSEERIRSGVKRLSKSRQGSTQGRLDDFFKVTGSLSSAKRKEPEP
KGSAKKKAKTGAAGKFKRGK
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgggaattcaaggcctggccaaactaattgctgatgtggcccctagtgccatccgggag
aatgacatcaagagctactttggccgcaaggtggccatcgatgcctccatgagcatttac
cagttcctgattgcagttcgtcaggggggcgatgtgctacagaatgaggaaggtgagacc
accagtcacctgatgggcatgttctaccgcaccatccgcatgatggagaatggcatcaag
ccggtgtatgtctttgatgggaaaccgccacagctcaagtcaggtgagctggccaaacgc
agtgagcggcgtgctgaggcggagaagcagctgcaagaggctcaggctgctggggctgag
gaagaagtggaaaaattcaccaagcggctagtgaaggtcactaaacagcacaatgatgag
tgcaagcacctgctgagcctcatgggcattccgttccttgatgcacccagcgaggcagag
gccagctgcgctgccctggtgaaagccggcaaagtctatgctgcagccaccgaggatatg
gactgcctcaccttcggcagccccgtgctgatgcgacatctgaccgccagtgaggccaag
aaactgcccatccaggaattccacctgagccggattctgcaggagctgggtctgaaccag
gagcagtttgtggatctttgcatcctgctgggcagtgactactgtgaaagcatccggggc
attgggcccaagcgggcggtggatctcatccagaagcacaagagcatcgaggagatcgtg
cggcgacttgaccccaacaagtaccctgtaccggaaaattggctgcacaaagaggcccag
cagctcttcctggagcccgaggtgctggatccagagtctgtggaactgaagtggagcgag
ccaaatgaagaggagctggtcaagttcatgtgtggtgaaaagcagttctctgaggagcga
atccgcagtggggtcaagcggctgagtaagagccgccaaggcagcacccagggccgtctg
gatgatttctttaaggtcactggctctctgtcctcagctaagcgcaaggagccagaaccc
aagggatccgctaagaagaaggcaaagactggggcagcggggaagttcaagagaggaaaa
taa

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