KEGG   Sciurus carolinensis (gray squirrel): 124958688
Entry
124958688         CDS       T08117                                 
Name
(RefSeq) endoribonuclease ZC3H12A-like
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ncar  Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ncar03019]
    124958688
Messenger RNA biogenesis [BR:ncar03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     124958688
SSDB
Motif
Pfam: RNase_Zc3h12a Regnase_1_C UBA_6 zf-CCCH_4 zf-CCCH_2 UBA_N4BP1 zf-CCCH
Other DBs
NCBI-GeneID: 124958688
NCBI-ProteinID: XP_047372988
LinkDB
Position
1:complement(181655899..181664333)
AA seq 598 aa
MSGPCGERPVQKASPTMSLWGLEDSHSCRGPPRPAQEPTPEEASALELQMKVDFFRKLGY
SSSEIHSVLQKLGVQADTNTVLGELVKHSAASERECQSSPDPCPQLPLVPRGGGTPKAPS
LEPSLPEEGKEGRDLRPVVIDGSNVAMSHGNKEVFSCRGILLAVTWFLERGHTDITVFVP
SWRKEQPRPDVPITDQHILRELEKRKILVFTPSRRVGGRRVVCYDDRFIVKLAYDSDGVV
VSNDTYRDLQGERQEWKRFIEERLLMYSFVNDRFMPPDDPLGRHGPSLDNFLRKKPLPSE
HRKQPCPYGRKCTYGVKCRFFHPERPSRPQRSVADELRANALLSPPRAPGKDKSSQRSSP
SPQSGSLPTEGEPSSQEGKKLGARASPGPRQEGLTQTFAPAGRSLPLSGVSGGTLGPTDW
LPQTLDSLPYTSQDCLDSGIGSLESQMSELWGVRAGGPSEPGPPRDPYSGYRHYGSELQA
APAFPAFGRAMGAGHFSVPTDYTPPPPAFASREYWSEPYPLPPPTPVLEPQVPSPGAGGG
PWGGAGGLAKERASVYTKLCGVFPPHLVEAVMGRFPQLLDPQQLAAKILSYKSQHLAE
NT seq 1797 nt   +upstreamnt  +downstreamnt
atgagtggcccctgtggagagaggcccgtccagaaagccagccccaccatgagtctgtgg
gggcttgaggacagccacagctgtcggggtcccccccggccagcccaggagcccacccca
gaggaggcatcagctttggagctgcagatgaaggtggacttcttccggaagctgggctac
tcatcctctgagatccacagcgtcctgcagaagctgggggtccaggcagacaccaacaca
gtgctgggcgagctggtgaagcacagtgcagcctccgagcgagagtgccagtcctccccg
gacccctgccctcagctccctctggtaccccggggtgggggcacccccaaggcccccagc
ctggagccctcactcccagaagagggcaaggagggcagagacctgaggccagtggtcatc
gatgggagcaatgtggccatgagccacgggaacaaggaggtcttctcctgccggggcatc
ctgctggctgtgacctggtttctggagcgtggccacacagacatcacagtgttcgtgcca
tcctggaggaaggagcagcctcggcccgatgtgcccatcacagaccagcacatcctgcgg
gaactagagaagaggaagatcctggtgttcacgccgtcccggcgcgtgggaggcaggcgg
gtggtgtgctacgacgaccgcttcatcgtgaagctggcctacgactccgacggggtcgtg
gtctccaacgacacctaccgcgacctccagggcgagcggcaggagtggaagcgcttcatc
gaggagcggctgctcatgtactccttcgtcaatgacaggttcatgccccccgatgacccc
ttgggccggcatggacccagcctggacaacttcctgcgtaagaagccactcccttctgag
caccggaagcagccgtgtccctatgggaggaaatgcacctacggggtcaagtgccggttc
ttccaccctgagcggcccagccgcccccagcgctccgtggctgatgagctccgtgccaac
gccctcctctcgcccccgagggccccgggcaaggacaaaagtagccagcggtcttctcct
tcccctcagtcaggctctctgcccacagagggtgagccgagcagccaggaagggaagaag
ctgggggcccgggcatccccagggccccggcaggaggggctgacacagaccttcgcccca
gctggcaggagcctccccctcagcggggtcagcggcggcaccttggggcccacagactgg
ctcccgcagaccctggactcactgccgtacacctcccaggactgcctggactccggcatc
ggctctctggagagtcagatgtcagaactgtggggggtccgagcaggaggcccaagtgag
ccagggcccccgcgggacccttactctggctaccgccactacgggtccgagctccaggct
gcacctgccttccctgcctttggacgggccatgggtgccggccacttcagtgtccctact
gactacacgcccccgccacccgccttcgcatcgcgagagtactggtcggagccgtaccca
ctgcccccgcccaccccggtcctggaaccccaggtgccaagcccaggggctggtggggga
ccctggggcggggcgggaggcctggccaaggagcgggccagcgtgtacaccaagctgtgt
ggcgtcttccccccgcacctggtggaggccgtgatggggcgcttcccgcagctcctggac
ccccagcagctggcggccaagatcctttcctacaagtcgcagcacctcgccgagtga

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