Sciurus carolinensis (gray squirrel): 124958688
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Entry
124958688 CDS
T08117
Name
(RefSeq) endoribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124958688
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
124958688
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
zf-CCCH_2
UBA_N4BP1
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
124958688
NCBI-ProteinID:
XP_047372988
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All DBs
Position
1:complement(181655899..181664333)
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AA seq
598 aa
AA seq
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MSGPCGERPVQKASPTMSLWGLEDSHSCRGPPRPAQEPTPEEASALELQMKVDFFRKLGY
SSSEIHSVLQKLGVQADTNTVLGELVKHSAASERECQSSPDPCPQLPLVPRGGGTPKAPS
LEPSLPEEGKEGRDLRPVVIDGSNVAMSHGNKEVFSCRGILLAVTWFLERGHTDITVFVP
SWRKEQPRPDVPITDQHILRELEKRKILVFTPSRRVGGRRVVCYDDRFIVKLAYDSDGVV
VSNDTYRDLQGERQEWKRFIEERLLMYSFVNDRFMPPDDPLGRHGPSLDNFLRKKPLPSE
HRKQPCPYGRKCTYGVKCRFFHPERPSRPQRSVADELRANALLSPPRAPGKDKSSQRSSP
SPQSGSLPTEGEPSSQEGKKLGARASPGPRQEGLTQTFAPAGRSLPLSGVSGGTLGPTDW
LPQTLDSLPYTSQDCLDSGIGSLESQMSELWGVRAGGPSEPGPPRDPYSGYRHYGSELQA
APAFPAFGRAMGAGHFSVPTDYTPPPPAFASREYWSEPYPLPPPTPVLEPQVPSPGAGGG
PWGGAGGLAKERASVYTKLCGVFPPHLVEAVMGRFPQLLDPQQLAAKILSYKSQHLAE
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcccctgtggagagaggcccgtccagaaagccagccccaccatgagtctgtgg
gggcttgaggacagccacagctgtcggggtcccccccggccagcccaggagcccacccca
gaggaggcatcagctttggagctgcagatgaaggtggacttcttccggaagctgggctac
tcatcctctgagatccacagcgtcctgcagaagctgggggtccaggcagacaccaacaca
gtgctgggcgagctggtgaagcacagtgcagcctccgagcgagagtgccagtcctccccg
gacccctgccctcagctccctctggtaccccggggtgggggcacccccaaggcccccagc
ctggagccctcactcccagaagagggcaaggagggcagagacctgaggccagtggtcatc
gatgggagcaatgtggccatgagccacgggaacaaggaggtcttctcctgccggggcatc
ctgctggctgtgacctggtttctggagcgtggccacacagacatcacagtgttcgtgcca
tcctggaggaaggagcagcctcggcccgatgtgcccatcacagaccagcacatcctgcgg
gaactagagaagaggaagatcctggtgttcacgccgtcccggcgcgtgggaggcaggcgg
gtggtgtgctacgacgaccgcttcatcgtgaagctggcctacgactccgacggggtcgtg
gtctccaacgacacctaccgcgacctccagggcgagcggcaggagtggaagcgcttcatc
gaggagcggctgctcatgtactccttcgtcaatgacaggttcatgccccccgatgacccc
ttgggccggcatggacccagcctggacaacttcctgcgtaagaagccactcccttctgag
caccggaagcagccgtgtccctatgggaggaaatgcacctacggggtcaagtgccggttc
ttccaccctgagcggcccagccgcccccagcgctccgtggctgatgagctccgtgccaac
gccctcctctcgcccccgagggccccgggcaaggacaaaagtagccagcggtcttctcct
tcccctcagtcaggctctctgcccacagagggtgagccgagcagccaggaagggaagaag
ctgggggcccgggcatccccagggccccggcaggaggggctgacacagaccttcgcccca
gctggcaggagcctccccctcagcggggtcagcggcggcaccttggggcccacagactgg
ctcccgcagaccctggactcactgccgtacacctcccaggactgcctggactccggcatc
ggctctctggagagtcagatgtcagaactgtggggggtccgagcaggaggcccaagtgag
ccagggcccccgcgggacccttactctggctaccgccactacgggtccgagctccaggct
gcacctgccttccctgcctttggacgggccatgggtgccggccacttcagtgtccctact
gactacacgcccccgccacccgccttcgcatcgcgagagtactggtcggagccgtaccca
ctgcccccgcccaccccggtcctggaaccccaggtgccaagcccaggggctggtggggga
ccctggggcggggcgggaggcctggccaaggagcgggccagcgtgtacaccaagctgtgt
ggcgtcttccccccgcacctggtggaggccgtgatggggcgcttcccgcagctcctggac
ccccagcagctggcggccaagatcctttcctacaagtcgcagcacctcgccgagtga
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