Sciurus carolinensis (gray squirrel): 124958800
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Entry
124958800 CDS
T08117
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04360
Axon guidance
ncar04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
124958800
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
124958800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124958800
Cell adhesion molecules [BR:
ncar04515
]
Immunoglobulin superfamily
NGL family
124958800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_1
V-set
LRR_14
LRR_9
Ig_2
LRRNT
Ig_6
LRR_LRWD1
Sp38
Herpes_gE_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
124958800
NCBI-ProteinID:
XP_047373233
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All DBs
Position
11:37159339..38329346
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AA seq
640 aa
AA seq
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MLNKMTLHPQQIMIGPRFNRALFDPLLVVLLALQLLVVAGLVRAQTCPSVCSCSNQFSKV
ICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAF
NGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLG
ELKRLSYISEGAFEGLSNLRYLNLAMCNLREIPNLTPLIKLDELDLSGNHLSAIRPGSFQ
GLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHH
NPWNCNCDILWLSWWIKDMAPSNTACCARCNTPPNLKGRYIGELDQNYFTCYAPVIVEPP
TDLNVTEGMAAELKCRASTSLTSVSWITPNGTVMTHGAYKVRIAVLSDGTLNFTNVTVQD
TGMYTCMVSNSVGNTTASATLNVTAATTTPFSYFSTVTVETMEPSQDEARTTDNNVGPTP
VIDWETTNVTTSLMPQSTRSTEKTFTIPVTDINSGIPGIDEVMKTTKIIIGCFVAITLMA
AVMLVIFYKMRKQHHRQNHHAPTRTVEIINVDDEITGDTPMESHLPMPAIEHEHLNHYNS
YKSPFNHTTTVNTINSIHSSVHEPLLIRMNSKDNVQETQI
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgaccttacatccacagcagataatgataggtcctaggtttaacagg
gccctatttgaccccctgcttgtggtgctgctggctcttcaacttcttgtggtggctggt
ctggtgcgggctcaaacctgcccttccgtgtgctcctgcagcaaccagttcagcaaggtg
atttgtgttcggaaaaacctgcgtgaggttccagatggcatctccaccaacacacggctg
ctgaaccttcatgagaaccaaatccagatcatcaaagtgaacagcttcaagcacttgagg
cacttggaaatcctccaattgagtaggaaccatattagaaccattgaaatcggggccttc
aatggtctggcgaacctcaacactctggaactctttgacaatcgtcttactaccatcccg
aatggagcttttgtatatttgtctaaactgaaggagctctggttgcgaaacaaccccatt
gaaagcatcccttcttatgcttttaacagaatcccttctttgcggcgactagacttaggg
gaattgaaaaggctttcatatatctcagaaggtgcctttgaaggtctgtccaacttgagg
tatttgaaccttgccatgtgcaacctacgggaaatccctaacctcacaccgctcataaaa
ctcgatgagttagatctttctgggaatcacttgtccgcaatcaggcctggatctttccag
gggttgatgcaccttcaaaaactgtggatgatacagtcccagattcaagtgattgaacgg
aatgcctttgataacctgcagtcactagtggagatcaacctggcccacaacaatctcaca
ttactgcctcatgacctcttcacacccttgcatcatctagagaggatacacttacatcac
aacccttggaactgtaactgtgacatactgtggctcagctggtggataaaagacatggcc
ccctccaacacagcttgctgtgcccggtgtaacactcctcccaatctgaaagggaggtac
atcggggagcttgaccagaattacttcacatgctatgctcccgtgattgtggagcccccc
acagacctcaacgtcactgaaggcatggcagctgagctaaagtgtcgggcttccacgtct
ctgacatccgtgtcttggattactccaaatggaacagtcatgacacacggggcatacaaa
gtacggatagctgtgctcagtgacggtacattaaatttcacgaatgtaaccgttcaagat
acaggcatgtacacgtgtatggtgagtaattctgttgggaacactactgcgtcagccacc
ctgaatgttactgcagcaaccactactcccttctcttatttttcaactgtcacagtagag
acaatggaaccttctcaggatgaggcacggaccacagacaacaacgtgggccccactccc
gtgatcgattgggagaccactaatgtgaccacctctctcatgccacagagcacaaggtcg
acagaaaaaacattcaccatcccagtgactgatatcaacagtgggatcccaggaattgat
gaggtcatgaaaactaccaaaatcatcattgggtgttttgtggccatcacactcatggca
gcggtgatgctggtcatcttctacaagatgaggaagcagcaccataggcagaaccatcac
gctccgacaaggactgttgaaatcattaatgtggatgatgagatcacaggggacacaccc
atggaaagccacctgcccatgcctgcgatcgagcatgagcacctaaaccactataattct
tacaaatctcccttcaaccacacaacaacagttaacacaataaattcaatacacagttca
gtgcatgaaccgttattgatccgaatgaactctaaagacaatgtacaagagactcaaatc
taa
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