Sciurus carolinensis (gray squirrel): 124958821
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Entry
124958821 CDS
T08117
Name
(RefSeq) ras and Rab interactor 1-like isoform X1
KO
K17638
Ras and Rab interactor 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04014
Ras signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
124958821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124958821
Membrane trafficking [BR:
ncar04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
124958821
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
RIN1
SH2
RA
TetR_C_28
Motif
Other DBs
NCBI-GeneID:
124958821
NCBI-ProteinID:
XP_047373271
LinkDB
All DBs
Position
11:9447706..9454963
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AA seq
780 aa
AA seq
DB search
MEDSREPGTHPPRAPCLSFPPEHLEREKPAQDPQYDTPDASRGRTGGPQQPARTVSLRER
LLLTRPVWLQLRANAAAALHVLRTEPPGTFLVRKSNTRQCQTLCVRLPEASGPSFVSSHY
IQESSDGVSLEGSALVFPDLVQLICAYCHTQDVLLLPLRLPRAIHQAATHKELEAISHLG
IEFWSSSLNTKAQWGPSEGPSLPRLKARSPQELDQGTGAALCFFNPLFPGDLGPTKREKF
KRSFKVRVSTETSSPLSPPAVPPPPVPVLPGAAPSHPERLPPGQLLRRESSVGYRVPGGT
SHVLPLLPSLREVDCGSPSSSEEEGPAGSQGIPRTSPGLGRRRPLLRSMSTAFCSLLAPE
RQVGRAAAALMQDRHTAVGQLVQDLLTQVRASPEPQELQGIRQALSRARAMLSTELGPEK
LLPPERLEHVLEKSLHRSVLKPLRPILAARLRLRLSADGSLSRLAEGLRLARAQGPGAFG
SHLSLPSPAETEQVRQKLLQLLRSYSPRAQVQRLLQACKLLYTALRTQAGEGAGADEFLP
LLSLVLAQCDLPDLLLEAEYMSELLEPALLTGEGGYYLTSLSASLALLSSLGQAHSLPLN
PSQELQRSLSLWEQRRLPATLQHLLRVAYQDPSSGCTSKTLAVPPGASVATLNELCATKF
RVSQPDAFGLFLYKEQNYHRLQPGALAHRLPTDGYLVYRRERPGTPGAAAEGAGSEQPES
GSQEEEKGGQGDGVAEAKASPGDSVGESETTAEQGEGQVGGDLVHSGEPEAAGARQQRSS
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atggaagactccagggaaccaggaacacaccctcccagagccccctgcctgagctttcct
ccggaacacctggagagagaaaagccagcccaggaccctcaatatgacacaccagacgcc
agccgggggcggacaggtgggccccagcaaccggcgcgcactgtgagcctgcgggagcgc
ctgctgctcacccggcctgtgtggcttcagctgcgggccaatgcagcagccgcactgcat
gtgctgaggaccgagcccccagggacgttcctggtgcggaaatcgaacactcgccagtgc
cagaccctgtgcgtgcggctaccagaagccagtggtccctctttcgtctccagccactac
atccaggaaagttctgatggcgtctccttggagggctcagccctcgtgttccccgacctt
gtccagctcatctgcgcttactgccacacccaagacgtccttcttctcccgctgcggctc
cccagagccatccaccaggcagccacccacaaggagctggaggctatctcccatctgggc
attgagttctggagctcctctctcaacaccaaggctcagtggggcccatccgaaggccca
tctctgccccggctgaaggcccgatcccctcaggagctggaccagggcactggtgctgcc
ctctgcttcttcaatcccctgttccccggggacctgggccccaccaagcgagagaaattc
aagaggagcttcaaagtgcgtgtgtccacggagacctccagccccctgtctccacctgct
gtgccacctcccccagtccctgtgttgccaggggcggcccccagtcacccagaaaggctg
ccccctggtcagctgctgagaagggagagctcagtggggtaccgtgtgcctgggggcacc
agccacgtcctcccactcctgccctccctccgggaggtggactgtggctctcccagcagc
tctgaggaagaggggccagcagggtcccaggggatccccaggacatcccctggccttggc
cgccgccggcctctgctccggtccatgagcactgccttctgctccctgctggctcctgag
cggcaggtgggccgagcagctgcagcattgatgcaggacagacacacggctgtgggccag
ttggtgcaggacctactgacccaggtgcgggccagccctgagccccaggaactgcagggc
atccgccaggcactgagccgggcccgggccatgctgagcacagagctgggccctgagaag
ctgctaccaccagagaggctggaacacgtcctggagaagtcgctgcatcgctcagttctc
aagcctctccggcccatcctggcagcccgcctgcggctccggctttctgcagatggctcc
cttagccgcctggctgagggcctccgcctggcccgagcccaaggccctggagccttcggg
tcccacctaagcctgccctcccctgcggagaccgagcaggtgcgccagaagctcctgcag
cttctccgctcctactcgcctagggcccaggtccagcggctcttgcaggcctgcaagctg
ctctacacagccctgaggacccaagcaggggagggtgcaggtgcagatgagttcctgcca
ctgttgagccttgtcttggcccagtgtgaccttcctgatctcctgctggaagctgaatac
atgtcggagctgctggagccagctctgctcactggagagggtggctactaccttaccagc
ctgtcggccagcctggccttgctgagcagcctgggccaggcccacagcctccccctcaac
ccctcccaagagctgcagcgttccctgagcctctgggagcagcgccgcctgcctgccacc
ctccagcacctccttcgagtagcctaccaggatcccagcagcggttgcacctccaagact
ctagctgtgcctcctggggcctcagtcgccactctgaatgaactctgtgccaccaagttc
cgagtgagccagccggatgcttttggcctattcctatacaaggagcagaactaccaccgc
ctgcagcccggagccctggcccacaggcttcccacagacggctatctggtctaccgccgg
gagcgacctgggaccccaggggctgcagcagagggagcaggcagtgagcagccagagtca
gggagccaggaggaggagaaagggggccagggagatggagttgcagaggccaaagccagc
cccggggacagtgtgggagagtctgagacaactgctgagcagggagagggtcaggttggg
ggggaccttgtgcattcaggagagccagaggctgcaggagccaggcagcagaggagtagc
tag
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