Sciurus carolinensis (gray squirrel): 124958851
Help
Entry
124958851 CDS
T08117
Name
(RefSeq) speckle targeted PIP5K1A-regulated poly(A) polymerase
KO
K18709
speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:
2.7.7.19
2.7.7.52
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ncar03019
]
124958851
Enzymes [BR:
ncar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
124958851
2.7.7.52 RNA uridylyltransferase
124958851
Messenger RNA biogenesis [BR:
ncar03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
124958851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
zf-met
RRM_1
TUTase
RRM_7
tRNA_NucTransf2
Zf-C2H2_ZNF451_C
RRM_5
Motif
Other DBs
NCBI-GeneID:
124958851
NCBI-ProteinID:
XP_047373328
LinkDB
All DBs
Position
11:12484400..12496523
Genome browser
AA seq
875 aa
AA seq
DB search
MAAVDSDVESLPRGGFRCRLCHVTTANRPSLDAHLGGRKHRHLVELRAARKAQGLRSVFV
SGFPRDANSAQLSEYFQAFGPVASVVMDKDKGVFAIVEMGDVGAREAVLSQSQHSLEGHR
LRVRPREQKEFQSPASKSPKGAAPDSHQLAKALAEAPDVEAQMVKLVHLRELSEAERQLR
SLVVALMQEVFTEFFPGCVVHPFGSSVNSFDVHGCDLDLFLDLGDLEEPQPVSKAPESPS
LDSALASPLDPQALACAPVSPLGSQSPASPQDSEALDCETPSSSLAPQTPDSALASETVA
SPQSLPPASPLQEDRGEQDLGKALELAEAPKGEKPEGAAMLELVGSILRGCVPGVYRVQT
VPSARRPVVKFCHRPSGLHGDVSLSNRLALHNSRFLSLCSELDGRVRPLVYTLRCWAQGR
GLSGSGPLLNNYALTLLVIYFLQTRDPPVLPTVSLLTQKAGEGEQVEVDGWDCSFPRDAS
RLEPSTNAEPLSSLLAQFFSCISCWDLAGSLLSLREGQALPVTGGLPSNLWEGLRLGPMN
LQDPFDLSHNVAANVTSRVVGRLQNCCRAAANYCRSLQYQHRSSRGRDWGLLPLLQPSSP
SSLLSAMPIPLPPFPFPQLTAAVVQVLREALGCHIEQGTKRPRSEGGGTEESPQGGTNKR
FKLDGQKSCEEGKGEQQGCVGDHNEDGVEEMVIEVGETPQDWAMQSPGQPGEPPLVTRKY
LATGEEGQPGHALLLAEHRPVEPEVAQEEMKGETGKGESSPSAVSWRCALWHRVWQGRRR
ARRRLQQQAKEGDEGNAGLGAEWLAAEARVTQELRGLNSGEQRPKTEPLLAFVVSASQAD
QTLSVTPLQDSQGLFPDLHHFLQVFLPQALRKLLK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtggattcggatgtcgaatcgctgcctcgtgggggtttccgctgccgcctc
tgccacgttactacagccaaccgacccagcctagatgcccacttgggaggccggaagcac
cggcatctagtagaactacgagctgccagaaaggcccagggacttcgaagtgtgtttgtt
agtggctttcccagagatgcgaattctgctcagctttctgagtacttccaggcatttgga
cctgtggccagtgttgtcatggataaagacaagggagtatttgccattgtggagatggga
gatgtgggtgctcgggaggctgtcttatcacagtcccagcacagcctagaaggacaccgc
ttgcgggtccggccacgggagcagaaggagttccagagtccagcctccaaatcccccaaa
ggagcagcacctgacagtcaccagctggccaaagcactagctgaggctccagatgtggaa
gcacagatggtaaaacttgtccatttgagggaattgtcagaggctgaacggcagcttcgg
agccttgtggtagccctgatgcaggaagtcttcacagagttcttccctggctgtgtggtc
catccttttggctcttctgtaaacagctttgatgtccatggctgtgatcttgacctcttc
ttggatctgggtgacttggaagagccccagccagtctcaaaggctccagagtctccatcc
ttggactcagcccttgcttctccattggaccctcaagccctggcctgcgccccagtctct
cctctaggctcacagtctccagcttctccccaggattctgaagctctggactgtgaaact
ccttcctcctccctggcaccccaaactccggactcagctttggcttctgagactgttgcc
tctccccagtccctgcctccagcctcaccactgcaggaggacaggggggagcaggacctg
gggaaggccctggaattagcagaggccccaaagggggagaagccagagggagcagcaatg
ctggagctggtgggatccattctccggggctgtgtccctggggtataccgagtccaaact
gtgccttctgcccggcgccctgttgtcaaattctgccatcggccttctggtcttcatggt
gacgtctccctcagtaaccggctggccctgcataactcccgtttcctgagtctgtgctct
gagctggatgggcgagtccggcccctcgtgtacactctccgctgctgggctcagggtcga
gggctgtcagggagtggcccccttctcaataactacgctttgactttgctggtcatctac
ttccttcagaccagggaccctcctgtgttgcccactgtgtccctactcacccaaaaagca
ggtgagggggagcaagtggaagttgatggctgggactgtagttttcccagggatgcctca
agactggagcccagcaccaacgcggagcccctcagttccctgctggcccagttcttctcc
tgcatctcttgctgggatcttgctggctcactgctatccctgagggagggtcaggcattg
ccagtaacagggggcctgccctctaatctctgggaaggtctgcgccttggccccatgaat
ctccaggacccctttgacctgagtcacaatgttgcagccaacgtgaccagccgggtggtt
gggcgtctacagaactgctgccgagcagcagctaattattgccgaagcctccagtaccag
caccgctcctctaggggtcgggactgggggctgctcccccttctgcagcccagctctccg
agctccctgctgtctgccatgcctattcctttacccccttttcccttcccccagcttact
gctgctgtggtccaggtgttaagagaagcactgggatgccatatagaacagggaaccaag
agaccacggtcagaaggaggtgggactgaggagtctccccagggagggacaaacaaaaga
ttcaagctagatggacagaagagctgtgaggaggggaaaggggagcagcagggatgtgta
ggggaccataatgaagatggggtggaagaaatggttatagaagttggagagacaccacag
gactgggccatgcagagtcctgggcaaccaggggaaccacccctggtgaccagaaagtat
ctagccactggagaagaggggcagccaggccatgcattgctgttggctgagcacagaccc
gtggaacctgaggtggcccaagaagagatgaagggcgagacagggaagggtgaatcttcc
ccttctgcagtgagctggcgctgtgccttgtggcaccgagtatggcaggggcgacggcgt
gctcggagacgcttgcagcagcaagccaaggaaggagatgaaggcaatgctggcttggga
gcagagtggctggcagcagaggctcgggtgacccaggaactgaggggactgaatagtggt
gaacagaggccaaaaactgagccccttttggcctttgtggtgtcggcttcccaggctgac
cagactctctccgtgaccccactccaggactcccaaggcctattccctgatctccatcat
ttcttacaggtttttctccctcaagcacttagaaaactccttaagtga
DBGET
integrated database retrieval system
