Sciurus carolinensis (gray squirrel): 124958896
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Entry
124958896 CDS
T08117
Name
(RefSeq) V-type proton ATPase 116 kDa subunit a 3-like isoform X1
KO
K02154
V-type H+-transporting ATPase subunit a
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar00190
Oxidative phosphorylation
ncar01100
Metabolic pathways
ncar04142
Lysosome
ncar04145
Phagosome
ncar04721
Synaptic vesicle cycle
ncar04966
Collecting duct acid secretion
ncar05152
Tuberculosis
ncar05165
Human papillomavirus infection
ncar05323
Rheumatoid arthritis
Module
ncar_M00160
V-type ATPase, eukaryotes
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
124958896
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124958896
04142 Lysosome
124958896
09150 Organismal Systems
09155 Excretory system
04966 Collecting duct acid secretion
124958896
09156 Nervous system
04721 Synaptic vesicle cycle
124958896
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
124958896
09171 Infectious disease: bacterial
05152 Tuberculosis
124958896
09163 Immune disease
05323 Rheumatoid arthritis
124958896
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124958896
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124958896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V_ATPase_I
APG6_N
Motif
Other DBs
NCBI-GeneID:
124958896
NCBI-ProteinID:
XP_047373412
LinkDB
All DBs
Position
11:complement(8296494..8309313)
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AA seq
848 aa
AA seq
DB search
MSHSVTVSQPGTMGSMFRSEEVALVQLFLPTAAAYTCVGQLGELGLVEFRDLNASVSAFQ
RRFTVDIRRCEELEKTFTFLQEQVQRAGLALPPPEGRLPAPPPRDLLRIQEETERLAQEL
RDVQGNRQALRTQLHQLQLHSAVLHQDQGPPLAAALTDGPSSERTPLLPPHQGPHQHLRV
NFVAGAVEPHKAAAMERLLWRACRGFLIASFRETERPLEDPLTGEPVTWMTFLISYWGEQ
IGQKIRKITDCFHCHTFPFLEEEAARQGALQQLQQQSQELQEVLRETEWFLSQVLGQVQQ
LLPPGQVQVRKMKAVYLALNQCSLSSTHKCLIAEAWCAAQDLPALQRALHSSSSEAGVSA
VAHRIACRDMPPTLIRTNRFTASFQGIVDAYGVGCYQEVNPAPYTIITFPFLFAVMFGDV
GHGLLMFLFALAMVLAENRPAVKTAQNEIWQTFFGGRYLLLLMGLFSVYTGFIYNECFSR
ATTIFPSGWSVAAMANQSGWSDTFLSQHPLLTLDPNVTGVFLGPYPFGIDPVWSLATNHL
SFLNSFKMKMSVILGVTHMAFGVLLGVFNHVHFGQGHRLLLETLPELIFLLGLFGYLVFL
VVYKWLRVSAAGAASAPSILIHFINMFLFSRSPTNRPLFPGQEVVQHVLVVLALATVPVL
LLGTPLYLLHRRLRSRHSPRPAVARQDQEEDKAGLLDSPSASASEKGWSSDEEKAGCAGD
EAAELAASEVLMHQAIHTIEFCLGCISNTASYLRLWALSLAHAQLSEVLWAMVMRVGLRM
CGEVGVAAVALVPIFAAFAVMTVAILLVMEGLSAFLHALRLHWVEFQNKFYAGTGYKLSP
FTFAIQEE
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacagtgtgacggtgtcacaacctgggaccatgggctctatgttccggagtgag
gaggtggccctggtccagctcttcctgcccacagcggccgcctacacctgcgtgggccag
ctgggcgagctgggcctcgtggagttccgagacctcaacgcgtcggtgagtgccttccag
agacgcttcacggtggacattcggcgctgtgaggagctggagaagaccttcacctttctg
caggagcaggtgcagcgggctggcctggcgctgccccctcccgaagggaggctgccagca
cccccgcctcgcgacctgctgcgcatccaggaggaaacagagcgcctggcacaggagctg
cgggacgtgcagggcaaccggcaggcactgcggacccagctgcaccagctacagctacac
tcggccgtgctgcaccaggaccagggccctccgctggcggctgccctcaccgatgggccc
tcttcagagagaacgcccctgctcccgccccaccaagggccacaccagcacctgagggtc
aacttcgtggcaggtgccgtggagccccacaaagctgcggccatggagcgcctgctctgg
agggcctgccgcggcttcctcatcgccagcttcagagagaccgagaggccgctggaggac
ccgctgacgggtgagcctgtgacctggatgaccttcctcatctcctactggggtgagcag
atcggacagaagatccgcaagatcacagactgcttccactgccacaccttcccgttcctg
gaggaagaggcggcccggcagggggccctacagcagctgcagcagcagagccaggagctg
caggaggtcctccgagagacagaatggttcctgagccaggtgctgggccaggtacagcag
ctgctgccgccggggcaggtgcaggtccgcaagatgaaagccgtgtacctggccctcaac
cagtgcagcctgagcagcacgcacaaatgcctcatcgccgaggcctggtgtgccgcgcag
gacctgcccgccctgcagcgggcgctgcacagcagctcgagcgaggctggagtcagcgcc
gtggctcaccgcatcgcctgcagggacatgcccccgaccctcatccgcaccaaccgcttc
acggccagcttccagggcatcgtggacgcctacggtgtgggctgctaccaggaggtcaac
cctgctccatataccatcatcaccttccccttcctcttcgccgtgatgtttggcgacgtg
ggccacgggctgctcatgttcctcttcgccctggccatggtgcttgctgagaaccggcca
gctgtgaagaccgcgcagaatgagatctggcagaccttctttgggggccgctacctgctc
ctgctcatgggcctgttctccgtctacaccggcttcatctacaacgagtgcttcagccgc
gccaccaccatcttcccctcgggctggagtgtggccgccatggccaaccagtcaggctgg
agtgacacgttcctgtcccagcacccactgctcaccctggaccccaatgtcactggtgtc
ttcctgggaccctacccctttggcatcgacccggtctggagcctggccaccaaccacctg
agcttcctcaactccttcaagatgaagatgtccgtcatcctgggggtgacccacatggcc
ttcggggtgctcctcggagtcttcaaccacgtgcacttcggccaagggcaccggctgctg
ctggagacgctgcctgagctcatcttcctgctgggcctctttggctacctggtcttcctg
gtcgtctacaagtggctgcgcgtgtcggcggcgggggccgcctctgcccccagcatcctg
atccacttcatcaacatgttcctcttctcccgcagccccaccaaccggccgctcttcccc
gggcaggaagtggtgcagcatgtgctggtggtgctggccttggccacggtgcccgtcctg
ctgctgggcacacccttgtatctgctacaccggcggctgcgaagccgccactcaccaagg
cctgctgtggctcgacaggaccaggaagaggacaaggccgggcttctggactcccccagc
gcttccgcttccgagaagggctggagctctgacgaggagaaggcgggctgcgcaggggac
gaggcggccgagctcgccgcctccgaggtcctgatgcaccaggccatccacaccatcgag
ttctgcctgggctgcatctccaacacggcctcctacctgcgcctctgggcgctgagcctg
gcccatgcccagctgtccgaggtcctgtgggccatggtgatgcgcgtgggcctgcgcatg
tgcggggaagtgggcgtggcggcagtggcgctggtccccatcttcgcagcctttgcggtg
atgacagtggccatcctgctggtcatggaagggctgtctgctttcctgcacgccctgcgg
ctgcactgggtggagttccagaacaagttctacgcgggcaccggctacaagctgagcccc
ttcaccttcgccatccaggaggaatag
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