Sciurus carolinensis (gray squirrel): 124958931
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Entry
124958931 CDS
T08117
Name
(RefSeq) stromelysin-1-like
KO
K01394
matrix metalloproteinase-3 (stromelysin 1, progelatinase) [EC:
3.4.24.17
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04657
IL-17 signaling pathway
ncar04668
TNF signaling pathway
ncar05171
Coronavirus disease - COVID-19
ncar05202
Transcriptional misregulation in cancer
ncar05215
Prostate cancer
ncar05323
Rheumatoid arthritis
ncar05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
124958931
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
124958931
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
124958931
09162 Cancer: specific types
05215 Prostate cancer
124958931
09172 Infectious disease: viral
05171 Coronavirus disease - COVID-19
124958931
09163 Immune disease
05323 Rheumatoid arthritis
124958931
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
124958931
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ncar01002
]
124958931
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.17 stromelysin 1
124958931
Peptidases and inhibitors [BR:
ncar01002
]
Metallo peptidases
Family M10
124958931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
DUF4953
Reprolysin_4
Reprolysin_5
Motif
Other DBs
NCBI-GeneID:
124958931
NCBI-ProteinID:
XP_047373486
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All DBs
Position
11:complement(103230228..103238663)
Genome browser
AA seq
479 aa
AA seq
DB search
MRSLPILLLCVTVCSTYPLDAASRGEDTSMELLQKYLENYYGLAKDGIQFVRRKDSSPVV
KKIQEMQKFLGLEMTGKLDSNTLEMIHKPRCGVPDVGHFNTFPGMPKWRKNKLTYRIVNY
TPDLPRDAVDSAIEKALKVWEEVTPLTFSRLHEGEADIMISFAVREHGDFIPFDGPGYNL
AHAYAPGPGINGDAHFDDDEQWTKDTSGINLFLVAAHELGHSLGLLHSNNPEALMYPVYD
SFVDLARFHLSQDDVDGIQSLYGPAPVTTQDPVVPTESSPSDPGLDSPPTMCDPALSFDA
VSTLRGEILFFKDRHFWRKSLRTFEPEFYLISSFWPSLPSSVDAACEVTSKDTVFIFKGN
QFWAIRGHEVQAGYPRSIYTLGFPPTVRKIDAAISDKEKKKTYFFVEDKYWRFDEKSQSM
ESGFPRQVAKDFPGVDSKVDAVFEAFGFFYFFNGSSQLEFDPNAKKVTHVLKSNNWLNC
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaggagtctcccaattctgctgctgtgtgtgacagtttgctcaacctatccattggat
gcagcttcaagaggcgaggacaccagcatggagcttcttcagaaatacctagaaaactac
tatggccttgcgaaagatgggatacaatttgttagaagaaaggacagtagtcctgttgtt
aaaaaaatccaagaaatgcaaaagttccttggactggaaatgacgggaaagctggactct
aacacattggaaatgatacacaagcccaggtgtggagtccctgatgttggtcactttaat
acctttcctggcatgccaaagtggaggaaaaacaaacttacttacaggattgtgaattac
acaccagatttgccaagagatgctgttgattctgccattgagaaagctctgaaggtctgg
gaggaggtgactccacttacattctccaggttgcatgaaggagaggctgacataatgatc
tcatttgcagttagagaacatggagactttatcccttttgatggacctggatataatttg
gctcatgcctatgcacctgggccagggattaatggagatgctcactttgatgatgatgag
caatggacaaaggatacgtcagggatcaatttattcctggttgctgctcatgaacttggc
cactccctgggtctccttcactcaaacaaccctgaagccttgatgtatccagtctatgat
tcctttgtggatctggcccgcttccacctttctcaagatgatgtggatggcattcagtcc
ctctacggacctgcccctgtcaccactcaggatcctgtggtgcccaccgagtctagccca
tcagatcctgggctagactcaccaccaaccatgtgtgatccagctctgtcctttgatgca
gtcagcaccctgaggggagaaatcctattctttaaagacaggcatttttggcgcaaatcc
ctcaggacctttgaacctgaattttatctgatctcttcattttggccatcccttccttca
agtgtggatgctgcatgtgaagttactagcaaggatactgttttcatttttaaaggaaac
cagttctgggccatcagaggacatgaggtacaagcaggttacccaagaagcatctacaca
ctgggtttccctccaacagtaaggaaaattgatgcagccatttctgataaagaaaagaag
aaaacttacttctttgtagaggacaaatactggagatttgatgagaagagccagtcaatg
gagtcaggctttcccaggcaggtggctaaagactttccaggggtggattcgaaggttgat
gctgtttttgaagcatttgggtttttctatttcttcaatggatcttcacagttggagttt
gatccaaatgcgaagaaagtgacacatgtcttgaagagtaacaactggcttaattgttag
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