Sciurus carolinensis (gray squirrel): 124959202
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Entry
124959202 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: rap guanine nucleotide exchange factor 2-like
KO
K08018
Rap guanine nucleotide exchange factor 2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04010
MAPK signaling pathway
ncar04015
Rap1 signaling pathway
ncar04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124959202
04015 Rap1 signaling pathway
124959202
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
124959202
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
RA
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
124959202
NCBI-ProteinID:
XP_047373754
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Position
11:complement(23477255..23505653)
Genome browser
AA seq
1011 aa
AA seq
DB search
MRTPMFVCIAQQDYCHILKXVEKNMQKVEEEGEIVMVKEHRELDGTGTRKGHIVIKGTSE
RLTMHLVEEHSVVDPTFIEDFLLTYRTFLSSPTEVGKKLLEWFNDPHLRDKVTQVVLLWV
NNHFSDFEGDPAMTQFLEEFENNLEREKMGGHLRLLNIACAAKAKRRLVTLTKPSREAPL
PFILLGGSEKGFGIFVDSVDSGSKATEAGLKRGDQILEVNGQNFENIQLSKAMEILRINT
HLSITVKTNLFVFKKLLTRLSEEKKDGAPHLPKIGDTEKASGYSIPDLAVDVEQVAGLEK
ANKKSKANTVGGRNKLKKRLDKTRIILPQKPYNDIGIGPSQDDSRVGLRQTEHIPTALPV
SGTLSSCDPDVLPSHPRVSDSSTTPDLPDQVLRVFKADQQSRYVMISKDTTAKEVVIQAI
REFALTATPEQYSLCEVSVTPEGVIRQRRLPVQLSKLADRIQLSGRYYLKNNMETEILCS
DEDAQGLLRESRISLLQLSPVEVATQLSVRNFELFRSIEPTEYIDDLFKLKSETSYVNLK
KFEEVINQETFWVASEILRETNQLKRMKIMKHFIKIALHCRDCKNFNSMFAIISGLNLVP
VARLRATWKKLPNKYEKLFXDLQDLFDPSRNMAKYRNFLKSPNLQPPIIPLFPVIKKDLT
FLHEGNHSKVDGLVNFEKLRMIAKEIRHVGQMASVNVDPALMFRTRKKKWPSLGSLRQGS
ANARVLAVAETGGHRKWVRRSSFLRAKRLYEDAQMPQKVKQYLSNLELEMDEKSLRTLSL
QCEPATNALPKNPGDKKPVKSKTSPVAPGAGSQQKAQPQPQAPPQQPPHEADQGPWVPAG
ALYPSWKVPVKDLPPLGFNSPQDLKKIISLSEEESLEHPKKPADDTRSKASPQLSSPPTS
PQSSPRKGCTWAPRGTMDNFSDSGHSEISSXSSVVSNSSFDPVPVSLHGERHQRHPVSIV
ETNLGVGRTERVGVLQAPSPSVQGFFTSKDSPDDLPKAIIRLVFTLVMVHK
NT seq
3036 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacaccaatgtttgtctgcattgcccagcaagattactgccacatcctcaagtga
gtagaaaagaatatgcaaaaagtagaagaggaaggtgagatcgttatggtcaaagaacac
cgagaacttgatggaactggaacaaggaagggccacattgtcatcaagggcacctcagaa
aggttaacaatgcatttggtggaagagcattcagtagtagatccaaccttcatagaagac
ttcctgttgacctaccggacgtttctttctagtccaacggaagtgggcaaaaagttattg
gagtggtttaatgacccacacctcagagataaggttacacaggtagtattattgtgggtg
aataatcacttcagtgactttgaaggagatcctgcaatgactcaatttctagaagaattt
gagaataatctggaaagagagaaaatgggcggacatctaaggctgttaaatattgcatgt
gctgctaaggcaaaaagaagattggtgacgttaacaaagccatctcgggaagcgcctcta
ccttttatcttacttggaggctccgagaagggatttggaatctttgtcgacagtgttgat
tcaggtagcaaagcaacagaagcaggcttgaaacgtggggatcagatactagaagtaaat
ggtcaaaactttgaaaatatccagctgtcaaaagccatggaaattcttaggattaacaca
catctgtctatcactgtgaaaaccaacttatttgtgtttaaaaaacttctaacgagattg
tcagaagaaaaaaaagatggtgccccccaccttcccaaaattggtgataccgaaaaggcc
agcggctattccattccagacctggctgtagatgtagaacaggtggcaggacttgaaaaa
gccaataaaaaaagtaaagccaacactgtcgggggaaggaacaagctaaagaagaggctt
gacaagactcggattatcttgcctcagaaaccatataatgacattgggattggtccgtct
caagatgacagcagagtaggactaaggcagacagagcacatcccgactgcgttgccagtc
agcggcaccttgtcctcctgtgatcctgacgtgctgccgtcacatcctcgcgtttcagac
tccagcactactcctgatttgccagatcaagtgctaagggtttttaaggctgatcagcaa
agccgatacgtcatgatcagtaaggacaccacagcgaaggaagtggtcattcaggccatc
agggagtttgctcttactgccaccccagagcagtattcactgtgtgaggtctcagtcaca
cccgagggagtcatcagacagagaagacttccagttcagctttccaaacttgcggataga
atacaactgagcggaaggtattatctgaaaaacaacatggaaactgaaatcctttgttca
gatgaggatgctcaggggttgttgcgagagagtcgaatttccctcctgcagcttagccct
gtggaagttgccacccagctctccgtgcggaatttcgaactcttccgcagcattgaacct
actgaatatatagatgatttatttaaactgaagtcagaaaccagctatgtgaacctgaag
aaatttgaagaagtcattaaccaggaaacattttgggtggcgtctgaaattctccgagag
acaaaccagctgaagaggatgaagatcatgaagcatttcatcaagatcgcactgcactgt
agggactgcaagaattttaactccatgtttgcaatcatcagtggcctaaacctggtacca
gtggcaagactgcgagctacctggaaaaaacttcccaataaatatgaaaagctcttttag
gatctccaagacctttttgacccttccagaaacatggcaaaataccgcaatttcctcaag
agtccaaacctgcagcctcccataattcctctcttcccagttatcaagaaggatctcaca
ttccttcatgaaggaaaccattcaaaagtagacgggctggtcaacttcgagaagctaaga
atgatcgcaaaagaaatccggcatgttggccaaatggcttcagttaatgtggaccccgct
ctcatgttcaggactcggaagaagaaatggccgagtttggggtccctcagacagggtagt
gcaaatgcaagggtgctagctgttgctgagacaggtggtcatagaaagtgggtacgccgt
agttcctttctcagagccaaaaggctttatgaagatgcgcagatgcctcaaaaagtgaag
caatacctgtccaatctggagctggagatggatgagaagagtcttcggacgttatctctg
cagtgtgagccagcaaccaatgcattgcctaagaatcctggtgacaaaaagcctgtcaaa
tccaagacctccccagtggctccaggggcagggtcacagcaaaaagcccaaccccagcct
caggcgcccccacagcagccaccacatgaggctgaccaaggaccttgggttcctgccggg
gccctctacccttcatggaaggtgcctgtgaaggatctcccacctcttggtttcaactct
ccacaagatttaaagaaaattatttccctatctgaagaagagagtttggaacatcctaag
aagccagctgatgatacaagatccaaagcttctccacaactgtcttctcctcccacttcc
ccacagagttctccaaggaaaggttgtacttgggctcctaggggtactatggacaatttt
tcagattctggccacagtgaaatttcttcatgatctagtgttgtcagcaattcttctttt
gacccggtgccagtctcgctccatggtgagaggcaccagaggcatcctgtcagcattgtg
gaaacaaacctaggtgtgggcaggacagaacgtgttggggtactgcaggcccccagccct
tcggtacagggtttctttacatccaaggattctcctgatgatctacccaaggctataata
cgcttggtgttcactttggtaatggtacacaaataa
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