Sciurus carolinensis (gray squirrel): 124959781
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Entry
124959781 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: heat shock cognate 71 kDa protein-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03040
Spliceosome
ncar04010
MAPK signaling pathway
ncar04141
Protein processing in endoplasmic reticulum
ncar04144
Endocytosis
ncar04213
Longevity regulating pathway - multiple species
ncar04612
Antigen processing and presentation
ncar04915
Estrogen signaling pathway
ncar05020
Prion disease
ncar05134
Legionellosis
ncar05145
Toxoplasmosis
ncar05162
Measles
ncar05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124959781
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124959781
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124959781
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124959781
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
124959781
09152 Endocrine system
04915 Estrogen signaling pathway
124959781
09149 Aging
04213 Longevity regulating pathway - multiple species
124959781
09160 Human Diseases
09172 Infectious disease: viral
05162 Measles
124959781
09171 Infectious disease: bacterial
05134 Legionellosis
124959781
09174 Infectious disease: parasitic
05145 Toxoplasmosis
124959781
09164 Neurodegenerative disease
05020 Prion disease
124959781
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
124959781
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ncar01009
]
124959781
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncar03041
]
124959781
03009 Ribosome biogenesis [BR:
ncar03009
]
124959781
03110 Chaperones and folding catalysts [BR:
ncar03110
]
124959781
04131 Membrane trafficking [BR:
ncar04131
]
124959781
03051 Proteasome [BR:
ncar03051
]
124959781
03029 Mitochondrial biogenesis [BR:
ncar03029
]
124959781
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124959781
Protein phosphatases and associated proteins [BR:
ncar01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
124959781
Spliceosome [BR:
ncar03041
]
Complex B
Other components
Prp19 complex
124959781
Complex C
Prp19-CDC5 complex
124959781
Ribosome biogenesis [BR:
ncar03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
124959781
Chaperones and folding catalysts [BR:
ncar03110
]
Heat shock proteins
HSP70 / DNAK
124959781
Membrane trafficking [BR:
ncar04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
124959781
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
124959781
Proteasome [BR:
ncar03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
124959781
Mitochondrial biogenesis [BR:
ncar03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
124959781
Exosome [BR:
ncar04147
]
Exosomal proteins
Proteins found in most exosomes
124959781
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
DDR
Hydantoinase_A
Radial_spoke_3
Motif
Other DBs
NCBI-GeneID:
124959781
NCBI-ProteinID:
XP_047374133
LinkDB
All DBs
Position
11:complement(121828068..121832587)
Genome browser
AA seq
646 aa
AA seq
DB search
MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVA
MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS
SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAA
IAYGLDKKVGAERNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDNRMVNH
FIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRA
RFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELN
KSINPDEAVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTI
PTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDI
DANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKN
SLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELE
KVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagggacctgcagtcggcattgatcttggcaccacctactcttgtgtgggtgta
ttccaacatggaaaagtggagataattgccaatgatcaggggaaccgaactaccccaagc
tatgtcgccttcaccgacaccgaacgattaatcggtgatgctgcaaaaaatcaggttgca
atgaaccccaccaacacagtttttgatgccaaacgtctgataggacgtagatttgatgat
gcagttgtccagtctgatatgaagcactggccctttatggtggtgaatgatgcaggcagg
cccaaagttcaagtagaatacaagggagagacaaaaagtttctatccagaggaggtgtct
tccatggttctgacaaaaatgaaggaaattgcagaagcctaccttgggaagactgttacc
aatgctgtggtcacggtgccagcatatttcaatgactctcagcgtcaggcaaccaaagat
gccggaaccattgctggtctcaatgtgcttaggataatcaatgagccaactgccgctgct
attgcctatggtttagacaaaaaggttggagctgaaagaaatgtgctgatttttgattta
ggaggtggcactttcgatgtgtcaatcctcactatcgaggatggaatctttgaggtcaaa
tccacagctggagacacccacttgggtggagaagactttgacaaccgtatggtcaatcat
ttcatcgctgaattcaagcgcaagcataagaaggacatcagtgagaacaaaagagctgtc
cgacgtctccgtactgcatgtgaaagagctaagcgtaccctctcttccagtactcaggcc
agtattgagattgattctctctatgaaggaatcgacttctatacctccattacccgggct
cgatttgaagagttgaatgctgacctgttccgtggcacccttgatcctgtggaaaaagct
cttagagatgccaaactagacaagtcacagattcatgatattgtactggtgggtggttct
actcgtatccccaagattcagaagcttctgcaggacttcttcaacggaaaagaactgaat
aagagcatcaaccctgatgaggctgttgcttatggtgcagctgtccaggcagccatttta
tctggagataaatctgaaaatgttcaagatttgctgctcttggatgtcactcctctgtcc
cttggtattgaaactgctggtggagtcatgactgtactcatcaagcgtaataccaccatt
cctaccaagcagacacagaccttcacaacctactctgacaaccagcctggtgtgctcatt
caggtatacgaaggtgagcgtgccatgaccaaggataacaacctgcttggcaagtttgaa
cttacaggcatacctcctgcaccccgtggtgttcctcagattgaagtcacttttgatatt
gatgccaatggcatcctcaatgtctctgctgtagataagagtacaggaaaagagaacaag
attaccatcactaatgacaaaggtcgtttgagcaaggaagacattgagcgcatggtccag
gaagctgagaagtacaaagctgaagacgaaaagcagagggataaggtgtcatctaagaac
tcacttgagtcctatgcattcaacatgaaagcaactgttgaagatgagaagctgcaaggc
aagataaatgatgaggacaaacagaagattcttgacaaatgtaatgaaatcatcaactgg
ctggataagaatcagactgcagagaaagaagaatttgaacatcagcagaaagagctggag
aaagtctgcaaccccatcattaccaagctgtaccagagtgcaggaggcatgccaggagga
atgcctgggggcttccctggtgggggagctcctccctctggtggtgcttcctctgggccc
accattgaagaggttgactaa
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