Sciurus carolinensis (gray squirrel): 124959850
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Entry
124959850 CDS
T08117
Name
(RefSeq) crossover junction endonuclease MUS81-like isoform X1
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03440
Homologous recombination
ncar03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124959850
03460 Fanconi anemia pathway
124959850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncar03400
]
124959850
DNA repair and recombination proteins [BR:
ncar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
124959850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHD_MUS81
ERCC4
HHH_8
EME1-MUS81_C
MutL
Motif
Other DBs
NCBI-GeneID:
124959850
NCBI-ProteinID:
XP_047374257
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All DBs
Position
11:complement(9891172..9900435)
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AA seq
648 aa
AA seq
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MRRVQKPGRGPGEVRQRRRNVVETALLLATSGSAGAGRAAAGFLPVSIPLGPRDQRGPAL
TTVPSQVFSPDPRTIGVPASRARGSRGSALGLMAAPVRLGRKRPLPVCPNPLFVRWLTEW
RDEAASRGRRTRFVFQKALRSLRRYPLPLQSGREAKILQHFGDGLCRMLDERLQQHLASD
KPAPGSPPGEMRPAQKGPSAQVQDSSMPVLAQPQAGGSGGYWPARHSGARAVLLELYQEH
LNPAGHSFLTKEELLQRCAQKALKVVPGSARTWPALRSLLHRNLVLRTHQPARYSLTPEG
LELAQKLAESESLNLLNVGTGPEKPSGEESAVPGAASAELGASEGGDQQPLLELGPGEYR
VLLCVDVGETRGAGYRQELLRELQRMHVAHTVRKLHVGDFVWVAQETRPRDPARPGELVL
DRIVERKRLDDLCSSIIDGRFREQKFRLKRCGLGHRVYLVEEHSSVHNLSLPESTLLQAV
TNTQVIDGFFVKRTVDIKESAAYLALLTRGLERLYQSPLLQGHTLRSRPWGTPGDPESGA
RPSPNPLCSLLTFSDFNTGAIKNKAQSVREVFARQLMQVRGVSGEKAAALVDRYSTPASL
LAAYDACATPKEQEMLLSTIKCGRLQRNLGPVLSRTLSQLYCTYSPLT
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcggcgggtccaaaagcctggtcgcggaccgggggaggtcaggcagcgtaggcgaaac
gtggtggagaccgcgctcctattagccacttcgggtagtgcaggggcggggagggctgct
gcaggctttcttccagttagtatcccgttggggccacgtgatcagagaggtcccgccctc
accaccgtccccagccaggtgttcagtcctgaccccagaacgatcggtgtcccagcctcg
cgagctcgaggctccagaggatccgccctgggactcatggcggcgccggtccgcctgggc
cggaaacgcccgctgccggtttgccccaacccgctcttcgtacgctggctgaccgagtgg
cgggatgaggcggccagcagggggcgccgcacgcgtttcgtgtttcagaaggcgctgcgc
tccctccggcggtacccgctgcccctgcaaagcgggagggaagctaagatactccagcac
ttcggagatgggctctgccgtatgctagacgagcggctgcagcagcacctggcgtcagat
aaacctgctcctggctcaccacctggagagatgcgtccagcccagaaagggccatctgcc
caggtccaggactcctctatgccagttcttgcccagccccaagcaggaggctctggtggc
tactggccagctcggcactcaggagcccgggcagtcctactggagctgtaccaggaacac
ctgaatcctgcaggtcacagcttcctaaccaaggaggagctgctgcagaggtgtgcccag
aaggccctcaaggtagtccctgggagtgctcgaacctggccagccctccgttccctcctg
cacaggaacctggtcctcaggacacaccagccagccaggtactcactgaccccagagggc
ttggagctggcccagaagttggctgagtcagaaagcctgaacttgctgaatgtgggcact
ggacctgagaagccgtctggggaggagtcagcagtgccaggagcagcctcagctgagctg
ggtgccagtgaaggaggagaccagcagccactgctggagctggggcctggagagtacagg
gtgctgttgtgtgtggacgtcggcgagaccaggggggcagggtataggcaagagctgctg
cgagagctacagcggatgcatgtggcccacacggttcgcaagctgcatgttggggacttc
gtgtgggtggcacaggagaccaggcccagagacccagccagacctggagagttagtcctg
gaccgcatcgtggagcgcaagcgcctagacgacctgtgcagcagcatcatcgatggccgc
ttccgggagcagaagttccggctgaagcgctgcggtctggggcaccgggtgtacctggtg
gaggagcacagctcagtccacaacctcagccttcctgagagcacgctgctgcaggctgtc
accaacacccaggtcattgatggattctttgtgaagcgcacagtagacatcaaggagtca
gctgcctaccttgcccttttgacacggggcctggaaagactctaccagtcccctcttctt
cagggccacaccctacgcagccgtccctggggaaccccaggggaccctgaatcaggggcc
aggccctccccaaacccactctgctcactcctcaccttcagtgacttcaacacaggagcc
atcaagaacaaggcccagtctgtgcgtgaggtgtttgcccggcagctgatgcaggttcgc
ggagtgagtggggagaaggcagcggccctggtggatcgatacagcacccctgccagcctc
ctggctgcctatgatgcctgtgccacccccaaggagcaggagatgctgctgagcaccatc
aagtgtgggcgtctgcagaggaatctgggacctgttctgagcaggaccttatctcagctc
tactgcacctacagccccttgacttga
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