Sciurus carolinensis (gray squirrel): 124959909
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Entry
124959909 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: coatomer subunit beta-like
KO
K17301
coatomer subunit beta
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124959909
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124959909
Membrane trafficking [BR:
ncar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
124959909
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
124959909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Coatomer_b_Cpla
Coatamer_beta_C
HEAT_2
HEAT
Cnd1
HEAT_EZ
Arm
MMS19_N
CRAL_TRIO_2
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
124959909
NCBI-ProteinID:
XP_047374338
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All DBs
Position
11:62509370..62548548
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AA seq
953 aa
AA seq
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MTAAENVCYTLINVPMDSEPPSEISLKNDLEKGDVKSKTEALKKVIIMILNGEKLPGLLM
TIIRFVLPLQDHTIKKLLLVFWEIVPKTTPDGRLLHEMILVCDAYRKDLQHPNEFIRGST
LRFLCKLKEAELLEPLMPAIRACLEHRHSYVRRNAVLAIYTIYRNFEHLIPDAPELIHDF
LVNEKDASCKRNAFMMLIHADQDRALDYLSTCIDQVQTFGDILQLVIVELIYKVCHANPS
ERARFIRCIYNLLQSSSPAVKYEAAGTLVTLSSAPTAIKAAAQCYIDLIIKESDNNVKLI
VLDRLVELKEHPAHERVLQDLVMDILRVLSTPDLEVRKKTLQLALDLVSSRNVEELVIVL
KKEVIKTNNVSEHEDTDKYRQLLVRTLHSCSVRFPDMAANVIPVLMEFLSDSNEAAAADV
LEFVREAIQRFDSLRMLIVEKMLEVFHAIKSVKIYRGALWILGEYCSTKEDIQSVMTEVR
RSLGEIPIVESEIKKEAGELKPEEEITVGPVQKLVTEMGTYATQSALSSSRPTKKEEDRP
PLRGFLLDGXFFVAASLATTLTKIALRYVALVPEKKKQNSFVAEAMLLMATILHLGKSSL
PKKPITDDDVDRISLCLKVLSECSPLMNDIFNKECRQSLSQMLSAKLEEEKLSQKKESEK
RNVTIQPDDPISFMQLTAKNEMNCKEDQFQLSLLAAMGNTQRKEATDPLASKLNKVTQLT
GFSDPVYAEAYVHVNQYDIVLDVLVVNQTSDTLQNCTLELATLGDLKLVEKPSPLTLAPH
DFANIKANVKVASTENGIIFGNIVYDVSGAASDRNCVVLSDIHIDIMDYIQPATCTDAEF
RQMWAEFEWENKVTVNTNMIDLNDYLQHILKSTNMKCLTPEKALSGYCGFMAANLYARSI
FGEDALANVSIEKPIHQGPDAAVTGHIRIRAKSQGMALSLGDKINLSQKKTSI
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgacggctgctgagaacgtgtgctatactttaattaacgtgccaatggattcagaacca
ccatctgaaattagcttaaaaaatgatctagaaaaaggagatgtgaagtcaaagactgaa
gctttaaagaaagtaatcatcatgattcttaatggtgaaaagcttcctggacttctgatg
accatcattcgttttgtgctgcctcttcaggatcacaccatcaaaaaattactactggta
ttttgggaaattgttcctaaaacaactccagatggaagacttttgcatgaaatgattctc
gtatgtgatgcatacagaaaggatcttcaacatcctaatgagtttattcgaggatctact
ctacgttttctttgcaaactgaaggaagcagaattgctggaacctttaatgccagctatc
cgtgcttgtttggaacatcgacacagctatgttagaaggaatgctgttttagccatctat
actatctatagaaattttgaacatcttattcctgatgctcctgaattgatacatgacttt
ctggtgaatgagaaggatgcaagttgcaaaaggaatgcatttatgatgctaattcatgca
gatcaggatcgcgctttggattacctaagtacgtgtattgatcaagttcaaacatttgga
gacattctacagttggttattgttgagctaatttataaggtctgtcatgctaatccatca
gaaagggctcgtttcattcgttgcatttataacttactacaatcatctagccctgctgtg
aaatatgaagctgctgggacattagtaacactgtcaagtgcaccaactgcaatcaaggct
gctgctcagtgttacatcgatttaattattaaggagagtgataacaatgtaaagctcata
gttctggatcgattagtagagttgaaagagcatcctgctcatgagcgcgtccttcaggat
ctggtaatggacatactaagagtgttaagcacaccagacttggaagtacgcaagaaaact
ctgcaattagcattagatcttgtttcttctaggaatgttgaagagttggttattgtcttg
aagaaggaagtaattaaaacaaataatgtgtctgagcatgaagacactgacaaataccga
caactccttgtacgaacattgcattcctgctctgtccgatttccagatatggctgcaaat
gttattcctgtgttaatggaatttctcagtgacagtaatgaagcagcagctgctgatgtc
ttggagtttgttcgcgaagccattcaacgctttgatagcctgagaatgctgattgttgag
aagatgcttgaagtctttcatgctattaaatctgtcaagatttatcgaggtgcattatgg
atcctgggagaatactgtagtaccaaggaagacattcagagtgtgatgacggaggttcgc
aggtcccttggggagatcccaattgtagagtcagaaataaagaaagaagctggggaatta
aaacctgaagaagaaataactgtggggccagttcaaaaattggttactgaaatgggcacc
tatgcaactcagagtgccctcagcagttctagacccaccaagaaagaggaagacagacct
cccctgagaggattccttctggatggangattctttgttgctgcctcccttgccactact
ctaaccaagattgcattgcgctatgtagctttggttccagagaagaaaaaacaaaattct
tttgttgctgaggctatgttgctcatggcaactatccttcatttgggaaaatcctctctt
cctaagaagccaattaccgatgatgatgtagacagaatttccctgtgcctcaaggtctta
tctgaatgttcacctttaatgaatgacatttttaataaggaatgcagacagtccctttct
cagatgttatctgccaaacttgaagaagagaaactatctcaaaagaaagagtctgaaaag
agaaatgtgacaatacagcctgatgaccccatttccttcatgcaactgactgctaagaat
gaaatgaactgcaaggaagatcagtttcaactgagtttgttggcagcaatgggtaacaca
cagaggaaagaagctacagatcccctagcatctaaacttaacaaggtcactcagttgaca
ggtttctctgatcctgtatatgcagaagcttatgttcatgtcaatcagtatgatattgtc
ctggatgtacttgttgtgaaccaaaccagtgatactttgcagaactgcacattagagtta
gctactctaggggatctgaaacttgtggaaaagccatctcctttgactcttgctcctcat
gattttgcaaatattaaagctaatgtcaaagtagcatcaacagaaaatggaataattttt
ggcaatatagtttatgatgtctctggagcagcaagtgacagaaattgtgtggtcctcagt
gatatccacattgacatcatggactatatccagcctgcaacttgcactgatgctgaattc
cgccagatgtgggccgaatttgaatgggaaaacaaagtgacagttaacaccaatatgatt
gatttaaatgactacttacagcacatattaaagtcaaccaacatgaagtgccttactcca
gagaaggccctttctggttactgtggcttcatggcagccaatctttatgctcgttccata
tttggagaagatgcacttgcaaatgtcagcattgagaaaccaattcaccagggaccagat
gctgctgttactggccacataagaattcgtgcaaagagtcaggggatggccttaagtctt
ggagataaaatcaacttgtctcagaagaaaactagtatataa
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