Sciurus carolinensis (gray squirrel): 124959910
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Entry
124959910 CDS
T08117
Name
(RefSeq) homeobox protein PKNOX2
KO
K24891
homeobox protein PKNOX
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124959910
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
124959910
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Meis_PKNOX_N
Homeobox_KN
Homeodomain
RNA_pol_3_Rpc31
DUF7645
Med4
Na_trans_assoc
Motif
Other DBs
NCBI-GeneID:
124959910
NCBI-ProteinID:
XP_047374339
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Position
11:124781381..125049408
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AA seq
473 aa
AA seq
DB search
MMQHASPAPALTMMATQNVPPPPYQDSPQMTATAQPPSKAQAVHISAPSATASTPVPSAP
IDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDIENFVHQQEQEH
KPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDL
GGPYSPNQPSINLHSQDLLQNSPNSMSGVSNNPQGIVVPASALQQGNIAMTTVNSQVVSG
GALYQPVTMVTSQGQVVTQAIPQGAIQIQNTQVNLDLTSLLDNEDKKSKNKRGVLPKHAT
NIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQPMLDASNPDPAP
KAKKIKSQHRPTQRFWPNSIAAGVLQQQGGAPGTNPDGSISLDNLQSLSSDNATMAMQQA
MMAAHDDSLDGTEEEDEDEMEEEEEEEELEEEADELQTTNVSDLGLEHSDSLE
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaacatgcctccccagccccagctctgacaatgatggccacgcagaatgtccct
cccccaccctaccaggacagcccgcagatgacggcaactgcccagccaccctccaaggct
caggctgtccatatctctgcaccctcagctacggccagcacacctgtgcccagtgccccc
attgaccctcaggcccagctggaggctgacaagcgagctgtgtacaggcaccctcttttc
ccgctcctgacgctgctgtttgagaaatgtgaacaggccacccagggctctgaatgcatc
acctccgccagctttgatgtggacatcgagaactttgtccaccagcaggagcaggagcac
aaacccttcttcagcgatgatccagaactggacaatctgatggtgaaggcaatccaggtc
ctgaggatccacctgctggagttggagaaagtcaatgaactctgcaaggatttttgcaac
cgttatatcacctgcctcaaaaccaagatgcacagcgataacctgctcaggaatgacctc
gggggaccctactcccccaaccagccctccataaaccttcactcacaggacctcctgcag
aattcccccaattccatgtctggagtctccaataacccccaggggattgtggtcccagcc
tcagcgctccagcagggcaacatcgccatgacaaccgtcaactcacaagttgtgtcaggt
ggagccttataccaaccggttaccatggtaacctcccagggtcaggtggtcacccaagca
atcccccagggagccatccagatccagaacacacaggttaaccttgacctcacctccctc
ctggacaatgaggataagaagtccaagaacaaacgaggagtcttgcccaaacatgccacc
aatataatgcgttcttggctcttccaacatctcatgcacccctaccccacggaggatgag
aagaggcagatcgcagcccagacaaacctcaccctcctgcaagtaaacaactggttcatc
aatgcccgtaggcgcatcctgcagcccatgcttgatgccagtaacccagaccctgccccc
aaagccaagaagatcaagtctcagcaccggcccacccaaagattctggcccaactccatt
gctgcaggagtgctacagcagcagggtggtgccccaggaacaaaccctgacggttccatc
agtttggacaacctgcagtccctgtcctcagacaatgccaccatggccatgcagcaggct
atgatggctgcacatgatgactcattggatgggacagaagaagaggatgaggacgagatg
gaggaggaggaggaagaagaggagctagaggaggaggccgatgagctgcagacaacgaat
gtcagcgacctgggcttggaacacagtgactccctggagtag
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