Sciurus carolinensis (gray squirrel): 124959916
Help
Entry
124959916 CDS
T08117
Name
(RefSeq) tripartite motif-containing protein 29 isoform X1
KO
K12010
tripartite motif-containing protein 29
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ncar04121
]
124959916
Ubiquitin system [BR:
ncar04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124959916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRIM_CC
zf-B_box
ANCHR-like_BBOX
DUF7596
Motif
Other DBs
NCBI-GeneID:
124959916
NCBI-ProteinID:
XP_047374351
LinkDB
All DBs
Position
11:complement(119233562..119258905)
Genome browser
AA seq
616 aa
AA seq
DB search
MEAADASRSNGASPEARDARSPSGPNGSLENGTKADGKDSKTANGHGGEVAEGKSLGSAL
KAGEGKSALFSGNEWRRPIIQFVDSVDDKGSNYFSMDSAEGRRSPYAGLQLGASKKPPVT
FAEKKSIFSEPRKPSVSIVEPGEVRRNSYPRADGSLLRSKSGSEEVLCDSCIGNKQKAVK
SCLVCQASFCELHLKPHLEGAAFRDHQLLEPIRDFEARKCPLHGKTMELFCQTDQTCICY
LCMFQEHKNHSTVTVEVAKAEKETELSLQKEQLQLKIIEIEDEAEKWQKEKDRIKSFTTN
EKAILEQNFRDLVRDLEKQKEEVRAALEQREQDAVDQVKVIVDALDERAKVLHEDKQIRE
QLHSISDSVLFLQEFGALMSNYSLPPPLPTYHVLLEGEGLGQSLGNFKDDLLNVCMRHVE
KMCKADLSRNFIERNHMENGGDHRYMNNFPTSYGSEWSAPDTMKRYSMYLTPKGSARTSY
QPGSPGRLSKETNQKNFNNLYGTKGNYTSRVWEYSSSIQSSDDLPAVQGSSSFSLKAGAG
KTPYQFTTLGQATAEFSKPLDRSGLFKNNPGYPSLIRSQTPKAQPQTWKSGKQTLLSHYR
PFYVNKGNGMGSNEAP
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggaagccgcagatgcctccaggagcaacggggcgagccccgaagccagggacgcccgc
agcccatcaggccccaacggcagcctggagaatggcaccaaggcggatggcaaggatagc
aagacggccaacgggcacggcggggaggtggccgagggcaagagcctgggcagcgccctg
aaggcaggggagggaaagagcgccctgttctcgggtaacgagtggcggcggcccatcatc
cagttcgtggattcggtggatgacaagggttccaactacttcagcatggactccgcggaa
ggcaggcggtccccgtatgcggggctccagctgggggcctccaagaagccgcccgtcacc
tttgctgagaagaagtccatcttctcggagccccggaagccctcggtgtccatcgtggag
cccggggaggtccggaggaacagctacccgcgggccgacgggagcctcctgcggtccaag
tccggctccgaggaggtgctgtgcgactcctgcatcggcaacaagcagaaggccgtcaag
tcctgcctggtgtgccaggcctccttctgcgagctgcacctcaagccccacctggagggc
gccgccttccgcgaccaccagctgctggagcctatccgggacttcgaggcccgcaagtgc
cccctgcacggcaagaccatggagctcttctgccagacggaccagacctgcatctgctac
ctctgtatgttccaggagcacaagaaccacagcacggtgacggtggaagtggccaaggcg
gagaaagagacagagctgtccctgcaaaaggaacagctgcagctgaaaatcattgagatt
gaggatgaagctgaaaaatggcagaaggagaaggaccgtatcaagagcttcaccaccaat
gagaaggccatcctggagcagaacttccgagacctggtgcgtgacctggagaagcaaaag
gaggaagtgagggctgcactggagcagagggagcaggatgctgtggaccaggtgaaggtg
atcgtggatgccctggatgagagggccaaggtgcttcatgaggacaagcagatccgggag
cagctacacagcatcagcgactcagtgctatttctgcaggaatttggtgcattaatgagc
aattactctctccccccaccgctacccacctatcatgtcctgctggagggggagggcctg
ggacagtcactcggcaacttcaaggatgacctgctcaatgtgtgcatgcgccatgttgag
aagatgtgcaaggccgatctgagccgtaacttcattgagaggaaccacatggagaacggc
ggtgaccatcgctacatgaacaacttcccaaccagctacgggagcgagtggagtgccccg
gacaccatgaagaggtactccatgtacctcacgcccaaggggagcgcacggacatcctac
cagccagggtcccctggtcgcctctccaaggagactaatcagaagaacttcaacaacctc
tatggcaccaaaggtaactacacctcccgggtctgggagtactcctccagcattcagagc
tccgatgacctgcccgcagtccagggcagctcctccttctccctgaaagcaggcgctggg
aaaaccccctatcagttcaccaccttgggacaggccactgcagagttttccaagccactg
gaccgcagtgggctgtttaaaaataatcctggctatccctccctcatacgcagccagacc
cctaaggcccagccccagacctggaaatccggcaagcagactctgctgtctcactaccgg
ccattctacgtcaacaaaggcaacgggatgggctctaacgaggccccctga
DBGET
integrated database retrieval system
