Sciurus carolinensis (gray squirrel): 124959929
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Entry
124959929 CDS
T08117
Name
(RefSeq) cartilage matrix protein
KO
K19467
matrilin
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
124959929
Domain-containing proteins not elsewhere classified [BR:
ncar04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
124959929
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Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
VWA_3
FXa_inhibition
cEGF
EGF_CA
EGF_LRP2
vWA_Rv0959
VWA_CoxE
Copine
EGF
EGF_3
hEGF
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
124959929
NCBI-ProteinID:
XP_047374376
LinkDB
All DBs
Position
1:187295725..187304843
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AA seq
496 aa
AA seq
DB search
MRAASGTSLALCGLLLLLQPPPSLGLTPPSRGHLCRTRPADLVFVVDSSRSVRPVEFEKV
KVFLSQVIESLDVGPNATRVGVVNYASAVKQEFPLRAHSSKAALLQAVRRIQPLSTGTMT
GLALQFAITKAFSDAEGGRSRSPDISKVVIVVTDGRPQDSVRDVSARARASGIELFAIGV
GRVDKATLRQMASEPQDEHVDYVESYSVIEKLSKKFQEAFCLVSDLCATGDHDCEQVCIS
SPGSYTCACHEGFTLNSDGRTCNVCSGGGGSSATDLVFLIDGSKSVRPENFELVKKFINQ
IVDTLDVSDRLAQVGLVQYSSSVRQEFPLGRFHTKKDIKAAVRNMSYMEKGTMTGAALKY
LIDNSFTVSSGARPGAQKVGIVFTDGRSQDYINDAAKKAKDLGFKMFAVGVGNAVEDELR
EIASEPVAEHYFYTADFKTINQIGKKLQKKICVEEDPCACEAIVKFQARVEGLLQALTRK
LEAVSKRLAVLENRVV
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgagggccgcctctggcaccagcctggcgctctgtggcctgctgctgctgctccagccc
ccgccaagcctcggcctcacccccccgtccagagggcacctctgccgcacgcggcccgcg
gacctggtgtttgtcgtggacagctcgcgcagcgtgaggcccgtggagtttgagaaggtg
aaggtgttcctgtcccaggtcatcgagtcgctggatgtgggacccaacgccacccgggtg
ggcgtggtcaactacgccagcgccgtcaagcaggagttcccgctgcgggcgcacagctcc
aaggccgcgctgctgcaggcggtgcgccgcatccagccgctgtccaccggcaccatgacc
ggcctggccctccagttcgccatcaccaaggccttcagcgacgccgagggcgggcgctcc
cggtcccccgacatcagcaaggtggtcatcgtggtgacagacgggcggccccaggacagc
gtgcgcgacgtgtctgcgcgggcccgggccagcggtatcgaactgttcgccattggtgtg
ggccgcgtggacaaggccacattgcggcagatggccagcgagccgcaggacgagcacgta
gactacgtggagagttacagcgtcatcgagaagctgtccaagaagttccaggaggccttc
tgcttggtgtcggacctgtgtgccacgggggaccacgactgtgagcaggtgtgcatcagc
tccccaggctcctacacctgtgcctgccacgagggcttcaccctcaacagtgacggcagg
acctgcaacgtctgcagtggaggtggtggcagctcggccactgacctggtcttcctcatc
gatggctccaagagcgtgcggccagagaacttcgagctggtgaagaagttcatcaaccag
attgtggacaccctggatgtgtccgacaggctggcccaggtggggctggtgcagtactcg
agctccgtgcgccaggagttcccgctgggccgcttccacaccaagaaggacatcaaagcg
gccgtgcggaacatgtcctacatggagaagggcaccatgaccggcgcggccctcaagtat
ctcatcgacaactccttcactgtgtccagcggggcgaggcccggtgcccagaaggtgggc
attgtcttcactgacggccggagccaggactacattaatgatgctgccaagaaggccaag
gaccttggctttaagatgtttgctgtgggcgtgggcaatgccgtggaggacgagctgagg
gagatcgcctcggaacccgtggccgagcactacttctacacagccgacttcaagaccatc
aaccagatcggcaagaagttgcagaagaagatctgtgtggaggaggacccgtgtgcctgt
gaggccattgtgaaattccaggccagagtggaggggctgctgcaggccttgaccaggaag
ctggaggccgtcagcaagcggctggccgtcctggagaacagagtcgtctaa
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