Sciurus carolinensis (gray squirrel): 124959949
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Entry
124959949 CDS
T08117
Name
(RefSeq) proteasomal ATPase-associated factor 1 isoform X1
KO
K11887
proteasomal ATPase-associated factor 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ncar03051
]
124959949
Proteasome [BR:
ncar03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
Other PIPs
124959949
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR55
Beta-prop_EML_2
Beta-prop_SCAP
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
124959949
NCBI-ProteinID:
XP_047374403
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All DBs
Position
11:76535492..76563137
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AA seq
392 aa
AA seq
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MAAPLRIQSDWAQALRKDEGEAWLSCHPPGKPSLYGSLTCQGIGLDGIPEVTASEGFIVN
EINKKSIHISCPKESASSKFLAPYTTFSRIHTKSITCLDISSGGGLGVSSSSDGSMKIWQ
ASNGELRRVLEGHVFDVNCCRFFPSGLVVLSGGMDAQLKIWSAEDASCVVTFKGHKGGIL
DTAIVDRGRNVVSGSRDGTARLWDCGRSACLGVIADCGSSINGVAVGAADNSINLGSPEQ
TPSEREVGTEAKMLLLAREDKKLQCLGLQSRQPVFLFIGSDAFNCCTFLSGFLLLAGTQD
GNIYQLDVRSPRVPVQVIHRSGAPVLSLLSFRDGFIASQGDGSCFIIQQDLDYVIELTEA
DCDPVYKVATWEKQIYTCCRDGLVRRYQLSDL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgcctttgaggattcagagcgactgggcccaggccctcaggaaagatgaaggg
gaggcctggctgagctgtcaccctccagggaaaccatctttgtatggcagcctgacttgt
caaggaattggcctagatggtatcccagaggttacagcctcagaaggatttattgtgaat
gaaataaacaagaaaagcattcatatttcatgtccaaaggaaagtgcatcttccaagttt
ttggcaccatacactactttttccagaattcatacaaagagtataacatgtctggacatt
tccagcggaggaggtcttggcgtgtcttctagttccgatggtagcatgaagatctggcag
gcttccaatggagaactcagaagagtattggaaggacatgtgtttgatgtgaattgttgc
aggtttttcccatcaggccttgtggttctgagtgggggaatggatgctcagctgaagatc
tggtcagctgaagatgctagctgtgtggtgaccttcaaagggcacaaaggaggtatcttg
gatacagccatcgttgatcgagggaggaatgtggtgtctggttctcgagatggaactgca
cgactttgggattgtgggcgttcagcctgcctgggagtcattgcagactgtggttcatcc
attaatggagtagcagtgggtgctgctgacaactccataaaccttggctcaccggagcag
acacccagtgaacgggaggttggaacagaggcaaaaatgctgttattggcccgggaagat
aagaagcttcagtgcttgggactacagagcaggcagccggtgttcctctttattggctca
gatgccttcaactgctgtacttttctctctggcttcttgctgttggctgggacacaagat
ggaaacatttatcagctagatgtgagaagtccaagggttccggtacaagtcatccacaga
tcaggagcaccagttctatccctgctgagtttcagagatggattcattgctagccaagga
gatggaagctgttttattattcagcaagacctagactatgtcattgagctcacagaagct
gactgtgaccccgtgtataaggtagccacatgggagaagcagatctacacatgctgtcga
gatggtcttgtgcgacgctatcaactttctgacctctga
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