Sciurus carolinensis (gray squirrel): 124959953
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Entry
124959953 CDS
T08117
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ncar01009
]
124959953
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncar03021
]
124959953
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
124959953
Protein phosphatases and associated proteins [BR:
ncar01009
]
HAD phosphatases
Fcp/Scp phosphatases
124959953
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
124959953
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
124959953
NCBI-ProteinID:
XP_047374417
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Position
1:complement(130219786..130339135)
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AA seq
611 aa
AA seq
DB search
MADWAPTRSAGQKARVPPASRKAAGTKDTSALKQEDAFKRKTELEAAVKKKIEFERKALH
IVEQLLEENITEEFLMECGKFITPAHYSDVVDERSIIKLCGYPLCQKKLGIVPKQKYKIS
TKTNKVYDITERKSFCSNFCYKASKFFEAQIPKTPIWVREEERHPVFQLLKEGQSGHSGE
EVQLCSKAIKTSDIDNPGHFEEQYECSSSSTCSDCTSDNEQDFISSILPGNKPNAMGTRP
QLNQKSIMKKKVGQKANSKHRDKEQTVVDVTEQLGNCRLDCQEKAVACELPLQKVNTQIS
SYSPLHERLKTSGNFENKYMSEITFVGISKKSADHFKTKFAKSNQISKPACNSMQLCPEV
AKMNLLKILRETLIEWKTEETLKFLYGQNYASVCLKSCPASLVNEELDEDDINSPPDSHS
PVLVESQNSLDESLPFRGSDAAIKPLPSYENLKKETETLNLRIREFYRGRYVLNEETTKS
QDLEEIQHESTFPLIDSSSQNQIRKRIVLEKLSKVLPGLLGPLQITLGDIYTQLKNLIRT
FRLTNRNIIHKPVEWTLIAVVLLSLLTPILGIQKHSPKNVVFTQFIATLLEELHLKNEDL
ENLTVIFRTSC
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atggcagactgggctccgacgcgctctgccggccagaaggcccgggttccccccgcctcc
cgaaaagctgcaggtactaaagacacaagtgccttgaaacaagaagatgcttttaaaagg
aaaacagaacttgaagcagctgtgaaaaagaagattgagtttgagagaaaagctctacat
attgttgaacaacttttagaagagaatattacagaagaattcctaatggaatgtgggaag
ttcatcacacctgctcactatagtgatgtcgtggatgagcgttctattatcaaactctgt
ggttatcctttatgtcagaagaagttgggaattgtaccaaaacagaaatataaaatttct
accaaaaccaataaagtctatgatattactgaaagaaagtctttttgcagcaatttttgt
tataaagcatctaagttttttgaagcacaaattcccaaaactccaatatgggttcgagaa
gaagagaggcatcctgtttttcagctgctgaaggaaggacaaagtggccattcaggagag
gaagtacagttatgcagtaaagccattaaaacatcagatattgataatcctggtcatttt
gaagagcaatatgaatgtagttcttctagcacttgtagtgattgtaccagtgataatgag
caagactttatttcctccattctaccaggaaacaaaccaaatgcaatgggtacaaggcca
cagttgaaccaaaaaagcataatgaaaaagaaagttggtcaaaaagctaactccaaacac
agagacaaagaacagacagtagtagatgtcactgagcagttaggcaattgtagattagat
tgtcaggagaaagctgttgcttgtgaacttcctttacagaaagtaaatactcagatttct
tcatatagtcctttgcatgaaagattaaaaacttcaggaaattttgagaataaatacatg
tcagaaataacttttgtcggcataagtaaaaaaagtgctgatcatttcaagaccaaattt
gccaaatcaaaccaaatttctaagccagcctgtaattccatgcagttgtgtcctgaagtt
gcaaagatgaacttacttaaaattctaagagagactttgattgaatggaagacagaagaa
actttgaagtttttatatggccagaactatgcttctgtgtgtctgaaatcctgtccagcc
tctctggttaatgaagaacttgatgaagatgacataaactctcccccagatagtcattcc
cctgtcttggtggaatctcagaatagcctggatgaatctttacctttcagaggctcagat
gcagccattaaaccactgccaagttatgagaacttgaaaaaagaaactgaaacattaaat
ctaaggatcagggagttttatagaggacgatatgttttgaatgaagaaaccaccaaatca
caagacttggaagagattcagcatgaatccacctttccactgatagattcaagttcccag
aaccagattagaaaacgaatcgttcttgaaaaattgagcaaagtattgcctggacttttg
ggtccccttcagattacattaggagatatttacactcaacttaaaaatctcatccgaact
ttcagattaacaaatagaaatataatacacaaacctgtggagtggactttaattgctgtg
gttttgctgtcattattgaccccaattcttggcattcagaagcattctccaaaaaatgtg
gtgtttacacagttcatagccaccctgcttgaagaattacatttaaagaatgaagacctt
gaaaatttaacagtcatatttagaaccagctgttaa
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