Sciurus carolinensis (gray squirrel): 124959985
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Entry
124959985 CDS
T08117
Name
(RefSeq) AP-5 complex subunit beta-1-like
KO
K19022
AP-5 complex subunit beta-1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ncar03400
]
124959985
DNA repair and recombination proteins [BR:
ncar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
124959985
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GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_N
AP5B1_C
Motif
Other DBs
NCBI-GeneID:
124959985
NCBI-ProteinID:
XP_047374447
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Position
11:9961566..9974266
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AA seq
877 aa
AA seq
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MGPLSREAWAQRLGAFRASPSAFMAGADGEDLGRDLLSDLRSEKLSEQTKVSLLALSLEY
PAQLWPDVPAAEAAATSLLDTMVLLPPRPSALRRPLLLAATTVLASGGVLGPTSGASCRL
LPLLLGLASGRDVGRGFGPISEQRPLQATACECLRELESCKPGLLGGILGLLRSLLGQEG
PIQPLSLLLALALRNTLVVQPRSGASLQGLLMAGVSSTGSGPWDWTLAEKGHSHLQPQAP
CWPAAEEGACALAVLEPSPEEVRELRAAVAQLLDTSYLLTPVAQAQLLWLLGWALRGLQG
QTPALFKPQLVRLLGTAQLTLLHAVLALKAAFGEALFTAQDEALLLRRLTLAAQHPALPL
PTHLFYLHCLLSFPENCPLGPEGEEAAPLLLGPQLCRGLMPSLLHDPMVLLSRLHLLCLL
CAEDEEEEKGQVQNPQWYLEELLAGLQQRAALDGGPRVLATLCFQASYLVASCLARQPMI
LTPLIQGLTQLYRARPVLAPHFVDLLDRVGPELEEPLRVVLQQEVVSRPGRDEALRWHLQ
MLAKVAERDAQSATLSFLQAAAAHCANWGLQQTLLRVCRVLLRGGGGPGLADLLQVLARQ
LEDPDGRDHARLYYILLAHLAGPKLGVALGPSLAAPALTSSLVAENQSFAAALIVQEAPA
PIRLSVGPQKATGPLLVLQLQVEALEPVYSLELRFRVEGQLYAPLEAVHVPCLCPGRPAH
PLFLPLQPRRPAPAQLEVRALYTTPTGITCHAHLPPLPVNFADLFLPFPQPPEGAQPGFF
EGLWDSCLPKGAESRVWCPLGPQGLEALVSRHLEPFVMVAQPPTSYHIAIRLPPNSMLLL
RLQAAQVDDGVPVALRTNDWAVLPLAGDYLRGLSVTE
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atggggcccctgagccgggaagcttgggcccagcgcctgggggccttccgggccagcccg
tccgccttcatggcaggtgccgacggtgaggatctgggtcgcgacctgctgagtgacctg
aggagcgagaagctgagcgagcagaccaaggtttccttgctggccctgagcttggagtat
ccggcccagctatggcccgacgtccctgctgcggaggcggccgccacctccctgttggac
acgatggtcctcctacccccacggccctcagctctccggcggcccctgctgctggcagcc
accacagtcctggcctcaggaggcgtgctaggccctacctcgggagcctcctgccgactc
ctgcccttactccttggcttggcttcaggtcgtgatgtggggcgaggctttggccccatc
tcagaacagcgccccctgcaggccaccgcgtgtgagtgcctgcgagagctagagagctgc
aagcctgggttgttggggggcatcctggggctgctgcggagcctgctggggcaggagggc
cccatccagccactcagcctgctgttggcacttgctttgcgtaacaccctggtggtacag
cccaggtctggggctagtctgcagggcctgcttatggctggggtctcctccactgggagt
ggtccctgggactggacactagctgaaaagggccattctcaccttcagccccaggcaccc
tgctggccagcagctgaggagggggcgtgtgcccttgcagtgctagagcccagccctgag
gaggtccgggagctgcgggctgctgtggcccagcttctggatacctcctacctgctcacc
cctgtggcccaggcccagcttctgtggctgctgggttgggccctccggggtctgcaggga
cagacaccagcactcttcaagccacaattggtacggctgctgggcacagcacaactgacg
ctgctgcatgcagttcttgctctgaaggcggcctttggagaggcactgttcaccgcccag
gatgaggcactgctgctccgccgccttaccttggctgcccagcacccagctctgcccctg
cccacccacctcttttacctgcactgccttctgagcttccctgagaattgtcccctgggt
cctgaaggtgaggaggctgccccattgctgttggggccccagctgtgccgtggtctcatg
cccagtctcctgcatgacccaatggtcctcctgtcccgcctgcatttgttgtgcctgctt
tgtgctgaagatgaggaagaggagaaaggtcaggttcagaacccacagtggtacctggag
gagctgctggctggcttgcagcagagggcagccctggatggtggcccacgggtattggcc
actctctgcttccaggcctcatatttggttgccagctgcttggccaggcaacctatgata
ctgacacccttgatccagggactgacccagttgtaccgagctcgccctgtgctggctccc
cactttgtggaccttttggatagggtgggccctgagctggaggaacccctcagggtggtt
ctgcagcaggaggtggtgtcccggccaggaagggatgaagctcttcgttggcacctgcaa
atgctggcaaaggtggcagagagggatgctcagagtgccaccctcagctttctgcaggct
gcagctgcccactgtgccaactggggcctacagcagaccctgctgagggtttgcagggtc
ctgctgcgtgggggcggggggcctggcctggcggacttgctgcaggtactggccaggcag
ctagaggaccctgatgggcgtgaccacgcccgcctctactacatcctcctggctcatctg
gcagggcccaagctaggggtggccctgggcccctcacttgctgccccagcactgacctct
tcattagtggcggagaaccagagctttgcagcagcgctgatagtgcaggaggccccggcc
cctattcggctgagtgtggggccccagaaagccacaggccctcttctggtgctgcagctc
caggtggaagccctggagcctgtctattctctggagctgcgcttccgcgtggaaggacaa
ctctatgcacccttggaagctgtccacgtgccctgtctgtgtcctggccgccctgcgcac
cctctgttcctgcccctgcagcccagacgcccagccccggctcagctggaagtccgggcc
ctttacaccacacccaccggcatcacgtgccacgcccacctgccgcccttgcctgtgaac
tttgcagacctctttctgccttttccccagccccctgagggggcccagccaggcttcttt
gagggactctgggactcctgcctgcccaaaggtgctgagagtcgtgtgtggtgcccacta
ggaccacaaggtctggaagccttggtgtcccgccacctggagcccttcgtcatggtggcc
cagccccccaccagctaccacatagccatccgcctgcccccaaactccatgctgctgctg
cggctgcaggccgcgcaggtggacgacggagtgcctgtggccctgcgaaccaatgactgg
gccgtgctgcctctggctggagactatctccgtgggctttcagtcactgagtga
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