Sciurus carolinensis (gray squirrel): 124960185
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Entry
124960185 CDS
T08117
Name
(RefSeq) paired box protein Pax-6 isoform X1
KO
K08031
paired box protein 6
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04550
Signaling pathways regulating pluripotency of stem cells
ncar04950
Maturity onset diabetes of the young
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
124960185
09160 Human Diseases
09167 Endocrine and metabolic disease
04950 Maturity onset diabetes of the young
124960185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124960185
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
124960185
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GFIT
Motif
Pfam:
PAX
Homeodomain
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
124960185
NCBI-ProteinID:
XP_047374724
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Position
11:45802093..45829665
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AA seq
436 aa
AA seq
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MQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCDISRILQTHADAKVQVLDNQ
NVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVSKIAQYKRECPSIFAWEIRDRL
LSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRMLNGQTGSWGTRPGWYPGT
SVPGQPTQDGCQQQEGGGENTNSISSNGEDSDEAQMRLQLKRKLQRNRTSFTQEQIEALE
KEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREEKLRNQRRQASNTPSHIP
ISSSFSTSVYQPIPQPTTPVSSFTSGSMLGRTDTALTNTYSALPPMPSFTMANNLPMQPP
VPSQTSSYSCMLPTSPSVNGRSYDTYTPPHMQTHMNSQPMGTSGTTSTGLISPGVSVPVQ
VPGSEPDMSQYWPRLQ
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacagtcacagcggagtgaatcagctcggtggtgtctttgtcaacgggcggcca
ctgccggactccacccggcagaagatcgtagagctagctcacagcggggcccggccgtgc
gacatttcccgaattctgcagacccatgcagatgcaaaagtccaagtgctggacaatcaa
aacgtgtccaacggatgtgtgagtaaaattctgggcaggtattacgagactggctccatc
agacccagggcaatcggtggtagtaaaccgagagtagcgactccagaagttgtaagcaaa
atagcccagtataagcgggagtgcccgtccatctttgcttgggaaatccgagacagatta
ttgtccgagggggtctgtaccaacgataacataccaagtgtatcatcaatcaacagagtt
cttcgcaacctggctagcgaaaagcaacagatgggcgcagacggcatgtatgataaacta
aggatgttgaatggacagaccggaagctggggcacccgccctggttggtatcccgggact
tcagtgccagggcaacctacacaagatggctgccagcaacaggaaggagggggagagaat
accaactccatcagttccaatggagaagattcagatgaggctcaaatgcgacttcagctg
aagcggaagctgcaaagaaatagaacatcctttacccaagagcagattgaggccctggag
aaagagtttgagagaacccattatccagatgtgtttgcccgggaaagactagcagccaaa
atagatctacctgaagcaagaatacaggtatggttttctaatagacgggccaaatggaga
agagaggaaaaactgaggaatcagagaaggcaggccagcaacacccctagtcatattcct
atcagtagtagtttcagcaccagtgtctaccaaccaattccacaacccaccacacctgtt
tcctccttcacatctggctctatgttgggccgaacagacactgccctcaccaacacatac
agcgctctgccacccatgcccagtttcaccatggcaaataacctgcctatgcaaccccca
gtccccagccagacctcctcgtactcctgcatgctgcccaccagcccttcggtgaacggg
cggagctatgatacctacaccccccctcacatgcagacacacatgaacagtcagcccatg
ggcacctcgggcaccacttcaacaggactcatttcccctggggtgtcagttccagttcaa
gttcctggaagtgaacctgatatgtctcaatattggccaaggttacagtaa
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