Sciurus carolinensis (gray squirrel): 124960238
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Entry
124960238 CDS
T08117
Name
(RefSeq) myosin-binding protein C, cardiac-type isoform X1
KO
K12568
myosin-binding protein C, cardiac-type
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04820
Cytoskeleton in muscle cells
ncar05410
Hypertrophic cardiomyopathy
ncar05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124960238
09160 Human Diseases
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
124960238
05414 Dilated cardiomyopathy
124960238
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Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
ig
fn3
Ig_2
V-set
THB
Ig_DSCAM-DSCAML_C
C2-set_2
PKD_3
Tissue_fac
Herpes_gE_N
Motif
Other DBs
NCBI-GeneID:
124960238
NCBI-ProteinID:
XP_047374886
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All DBs
Position
11:32221473..32239393
Genome browser
AA seq
1275 aa
AA seq
DB search
MPEPGKKPVSAFSKKPRSVEVAAGSPAVFEAETERAGVKVRWQREGSDISASDKYSLVAE
GRRHRLTVQDAGPADQGCYAVIAGSSKVKFDLKVTEAEKAEPQPAPAQAPAEAPAAPGEA
LATELEGSTPSPEGSSSAAPGGPAPGGPEAPDDPIGLFVTRPQDGEVTMGGSITFLARVA
GASLLKPPTVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQASSAGGYRC
EVSTKDKFDSCNFNLTVHEAIGPGDLDLRSAFRRTSLAGGGRRTSDSHEDAGTLDFSSLL
KKRDSFRTPRDPKLEAPAEEDVWEILRQAPPSEYERIAFQHGVTDLRGMLKRLKGMKRDE
KKSTAFQKKLQPAYQVSKGHKIRLTVELADPDAEVKWLKNGQEIQMSGSKYIFESIGTKR
TLTISQCSLADDAAYQCVVGGEKCSTELFVKEPPVLITRALEDQLVMVGQRVEFECEVSE
EGAQVKWLKDGVELTREETFKYRFKKDGRRHHLIINEATLEDAGHYALRTSGGQALAELI
VQEKKLEVYQSIADLAVGAKDQAVFKCEVSDENVRGVWLKNGKELVPDSRIKVSHIGRVH
KLTIDDVTPEDEADYSFIPEGFACNLSAKLHFMEVKIDFVPRQEPPKIHLDCPGRTPDTI
VVVAGNKLRLDVPISGDPAPTVIWQKTITQGKKASAQSVPDAPEDAGASDEWVFDKKLLC
ETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVIDVPDAPAAPK
ISNVGEDSCTVQWEPPAYDGGQPVLGYILERKKKKSYRWMRLNFDLLQELSHEARRMIEG
VAYEMRVYAVNAVGMSRPSPASQPFMPIGPPSEPTHLAVEDVSDTTVSLKWRPPERVGAG
GLDGYSVEYCQEGCSEWVAALQGLTERTAMLVKDLPTGARLLFRVRAHNVAGPGGPVTTK
EPVTVQEILQRPRLQLPRHLRQTIQKKVGEPVNLLIPFQGKPRPQVTWNKEGQPLAGEEV
SIRNSPTDTILFIRSARRTHSGTYQVTVRIENMEDKATLVLQIVDKPSPPQDIRVTEAWG
FNVALEWKPPQDDGNTEIWGYTVQKADKKTMEWFTVLEHYRRTHCVVSELIVGNGYYFRV
FSHNMVGPSERAATTKEPVFIPRPGITYEPPKYKALDFSEAPSFTQPLANRSVIAGYNTI
LCCAVRGSPKPKISWFKNGLDLGEDARFRMFSKQGVLTLEIRKPCPFDGGVYVCRATNLQ
GEAQCECRLEVRVPQ
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaccagggaagaagccagtctctgccttcagcaaaaagccacggtcagtggaa
gtggccgcgggcagccctgcggtgttcgaggcggagacagagcgggcaggagtgaaggtg
cgctggcagcgggagggcagtgacatcagcgccagtgacaagtacagcctggtggccgag
ggcaggcggcacaggctgacggtgcaggacgcgggtcctgccgaccagggctgctacgcc
gtcatcgcaggctcctctaaagtcaagtttgacctcaaggtcacagaggcagagaaggca
gagccccagccagcccctgcccaggcccctgctgaggccccagcggccccgggagaagcc
ctggctactgagctggaaggaagcaccccaagtccagaagggtccagctcagcagccccc
ggtgggcctgcccctgggggccctgaagcccctgatgaccctattggtctctttgtgacg
cggccacaggatggcgaggtgaccatggggggcagcatcaccttcttggcccgagtggct
ggggccagcctcctgaagccgcccacagtcaagtggttcaagggcaagtgggtggacctg
agcagcaaggtgggccagcacctgcagctgcatgacagctacgaccgggccagcaaggtc
tacctctttgagttgcacatcactgatgcccaggccagctccgctggtggctaccgttgt
gaggtgtccaccaaggacaaatttgacagctgcaacttcaacctcactgtgcatgaggcc
attggccctggagacctggacctccgatcagctttccgccgcacgagcctggctggagga
ggtcggcgaaccagtgacagccatgaggacgctgggactctggacttcagctccctgctg
aagaagagagacagtttccggaccccgcgggaccccaagctggaggcaccagccgaggag
gacgtgtgggagatcctgcggcaggcacctccctcggagtacgagcgcatcgccttccag
cacggcgtgaccgacctgcgcggcatgctcaagaggctcaagggcatgaagcgcgacgag
aagaagagcacggcatttcagaagaagctgcagccggcctaccaggtgagcaagggccac
aagatccggctgactgtggagctggccgaccccgacgctgaggtcaagtggcttaagaac
ggacaggagatccagatgagtggcagcaagtacatcttcgagtccattggcaccaagcgc
acgctgaccatcagccagtgctcgctggcagacgatgcggcctaccagtgcgtggtgggc
ggagagaagtgcagcactgagctcttcgtcaaagagccccctgtgctgatcacgcgagcc
ctggaggaccagctggtgatggtggggcagcgtgtggagtttgagtgtgaagtgtccgag
gagggggcccaggtcaaatggctgaaggacggggtggagctgacccgggaggagaccttc
aaataccgattcaagaaggacgggcggagacaccacctgatcatcaacgaagccacgctg
gaggacgcggggcactacgccctgcgcaccagtgggggccaggcgctggccgagctcatc
gtgcaggagaagaagctggaggtgtaccagagcatcgcggacctggcggtgggcgccaag
gaccaggccgtgttcaagtgtgaggtctccgatgagaacgtgcggggcgtgtggctgaag
aacgggaaggagctggtgcccgacagccgcataaaggtgtcccacatcgggcgggttcac
aagctgaccattgatgacgtcacacctgaggatgaggctgactacagcttcatacccgag
ggcttcgcctgcaacctgtcagccaaactgcacttcatggaggtcaagattgacttcgtg
cccagacaggaacctcccaagatccacctggactgtccgggccgcacaccagataccatt
gtggttgtggctgggaacaagctgcgcctggatgtcccgatctctggggaccctgctccc
actgtgatctggcagaagaccatcacacaggggaagaaggcctcagcccagtcagtccct
gatgctcctgaggatgcaggtgccagtgatgagtgggtgtttgataagaagcttctgtgt
gagaccgagggccgggtccgtgtagagaccaccaaagaccgtagtatcttcacggtcgag
ggggcagagaaagaggatgagggtgtctacaccgtcacagtgaagaaccctgtgggcgag
gaccaggtcaacctcacagtcaaggtcatcgatgtgccagatgcccctgcggcccccaag
atcagcaacgtgggagaggactcctgcaccgtgcagtgggagccgcctgcctacgatggt
ggacagccggtcctgggttacatcctggagcgcaagaagaagaagagctaccggtggatg
cggctcaacttcgacctgctgcaggagctcagccacgaggcgcggcgcatgatcgagggc
gtggcctacgagatgcgcgtctacgcggttaacgcggtgggcatgtccaggcccagcccc
gcctcccagcccttcatgcctatcgggccccccagcgaacccacccacctggccgtggag
gatgtctcggacaccacagtctctctcaagtggcgacctccagagcgcgtgggcgcaggt
ggcctggatggctacagtgtggaatactgccaggagggctgctccgagtgggtggctgcc
ctgcaggggctgacagagcgcacagccatgctggtgaaggacctgcctaccggggcccgg
ctcctgttccgggtgcgggcacacaatgtggcaggacctggaggccccgtcaccaccaag
gaacccgttacagtgcaggagatactgcaacggccacggctccagctgcccaggcacctg
cgtcagacaattcagaagaaggtcggggagcctgtgaacctcctcattccttttcagggc
aagccccgacctcaggtgacctggaacaaagagggacagccgctggcgggcgaggaggtg
agcatccgcaacagccccacggacaccatcctgttcatccggtctgcccgccgcacacac
tcaggcacctaccaggtgacagtgcgcatcgagaacatggaggacaaggccacgctggtc
ctgcagatagtggacaaaccaagtcctcctcaggatattcgggtcactgaggcttggggc
ttcaatgtggctctggaatggaagccaccccaagatgatggcaacacagagatctggggt
tacacagtacagaaagctgacaagaagaccatggaatggttcactgtcttggagcattac
cgccgtacccactgtgtagtgtcggagctcatcgttggcaatggctattacttccgggtc
ttcagtcataacatggtgggtcccagtgagagggcagccaccaccaaggagcctgtcttt
atccccagaccaggcatcacatatgagccacccaaatacaaggccctggacttctctgag
gctccaagcttcacccagcccttggcgaaccgctcagtcatcgcgggctacaacactatc
ctctgctgtgctgtccggggcagccccaagcccaagatttcctggttcaagaatggcctg
gacttgggagaagatgctcgcttccgcatgttcagcaagcagggagtgttgaccctggaa
attagaaagccctgcccctttgatgggggtgtctatgtctgcagggccaccaacttgcag
ggcgaagcacagtgcgagtgccgcctggaggtgagagtgcctcagtga
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