Sciurus carolinensis (gray squirrel): 124960247
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Entry
124960247 CDS
T08117
Name
(RefSeq) LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase eta-like
KO
K05698
receptor-type tyrosine-protein phosphatase eta [EC:
3.1.3.48
]
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04520
Adherens junction
ncar05208
Chemical carcinogenesis - reactive oxygen species
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
124960247
09160 Human Diseases
09161 Cancer: overview
05208 Chemical carcinogenesis - reactive oxygen species
124960247
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ncar01009
]
124960247
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ncar04090
]
124960247
Enzymes [BR:
ncar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
124960247
Protein phosphatases and associated proteins [BR:
ncar01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
124960247
CD molecules [BR:
ncar04090
]
Proteins
124960247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
PTP_tm
fn3
PTP-SAK
Tc-R-P
PTPlike_phytase
PTP-NADK
DSPc
Y_phosphatase3
SusE
Motif
Other DBs
NCBI-GeneID:
124960247
NCBI-ProteinID:
XP_047374900
LinkDB
All DBs
Position
11:complement(31540519..31684758)
Genome browser
AA seq
1035 aa
AA seq
DB search
MTRGGGSPSSRSRGSRDPGAARGGWAPLAPPREAPARPGTRPPRGSRARLRRVAAAAAAA
AMSPGKPGAGGAGTRRTGWRRRRRRRRLEAATRAPELGHTAGPASRVPGTFQGAQGMKPE
AREARPPPRSPGLRWALPPPPLLLLLLAQIVCAGDVSDFRVTNVSTREIGLAWSSNDSES
FRILTKGAGKLGNDTTTNQSITIGGLRPGISYHFEIFPQGPNGTEGTPQTVDGRTDPSAV
FGIRVVHVTTTEMRLEWQNTDGASAYVYHLVVQSESGSREVNSSEEAATLQGLIPGTLYN
ITISPEASQVRGQLSSIVQYTRPSSVANIVINTSTTVATLSWQNPDAASPTYSYRLLIEK
AENSSNATQVVRTDVGVTNTTVMELIPGSPYRVEIFTQVGNVTESLTPSWESFCTEPAPV
TSFHCEMVFKEPALVLKWACPPGTNEGFELGISSGAWDNVTLLESCSPENGTEYRTEVTY
LNFSTSYNFSITTLSCEKMAVPTQNTCVTGITDPPPPDGSPNITSVSHNSVKVKFSGFEA
SHGPIKAYAVILTTGEAGHPSADVLKYTYEDFKKGASDTYVTYLINTEEKGRSQGLSEVL
KYEIDVGNESTTLGYYNGKLEPLGSYRACVAGFTNITFNLQNEGLINGAESYVTFSRYSE
AVFLPQDPGVIFGAVFGCIFGALVIVAVGGFIFWRKKRKDAKNNEVSFSQIKPKKSKLIR
VENFETYFKKQQADSNCGFAEEYEDLKLVGISLPKYAAELAENRGKNRYNNVLPYDISRV
KLSVQTHSTDDYVNANYMPGYHSKKDFIATQGPLPNTLKDFWRMVWEKNVYAIVMLTKCV
EQGRTKCEEYWPSKQAQDYGDITVAMTSEVVLPEWTIRDFTVKNIQTSESHPLRQFHFTS
WPDHGVPDTTDLLINFRYLVRDYMKQSPPESPILVHCSAGVGRTGTFIAIDRLIYQIENE
STVDVYGVVYDLRMHRPLMVQTEDQYVFLNQCVLDIIRSQKDSKVDLIYQNTTAMTIYEN
LEPVSMFGKTNGYIA
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcggaggaggcagcccgagcagccggagccgcgggagccgggatccgggcgcc
gcgcgcggggggtgggcgccgctcgctccgccccgagaagcccctgcacgcccagggacg
cggcccccccgcggcagccgcgccaggctccgccgtgtggccgccgccgccgcggccgct
gccatgtccccggggaagcccggggcgggcggagcggggacgaggcggaccggctggcgg
agaaggaggcggaggcggcggctggaggcggcgacgagggcgcccgagctcggacacacg
gcggggcccgcttcgcgcgtcccgggcacgttccagggcgcgcagggcatgaagccggag
gcgcgggaggcgcggccgcccccgcgctcgccggggctgcgctgggcgctgccgccgccg
ccgctgctgctgcttctcctggcccagattgtgtgtgcaggtgatgtttctgactttcga
gtgacgaatgtcagcaccagggaaatcggcttagcctggagcagcaatgactcagagtcc
tttaggattcttactaaaggggctggaaaacttgggaatgacacaaccaccaaccaaagt
atcaccattggtggcttacgccctggaatcagttatcattttgaaatatttcctcaagga
ccaaatgggactgaagggacaccccagacagttgatggtagaactgaccctagtgccgtg
tttggcatccgcgtggtccatgtcaccaccaccgagatgcggctggagtggcagaataca
gatggtgcttccgcgtacgtctaccacttggttgtacagtctgagagcggctcccgcgag
gtgaacagctctgaggaagcagccaccctgcagggcctcatcccgggcaccttatacaac
atcaccatctctccagaagccagccaggtccggggacagctcagctccattgtccagtac
acacggccaagcagtgtggccaacattgtcataaacaccagcaccacagtggcaacctta
agttggcagaaccctgatgcagcctcgcccacgtactcctaccgccttcttattgagaag
gctgaaaattccagcaacgcaactcaggtggtcaggacggatgtcggggtcactaacacc
acagtcatggagttgatacctggctcaccttacagagtggagatctttacacaagtgggg
aatgtcactgagtctctgacgcccagctgggagtctttctgtacagagcctgcaccggtg
acctccttccactgtgagatggtcttcaaagagccagccttggttctgaaatgggcctgc
cctcctggcaccaatgaaggcttcgagctagggatcagcagtggagcctgggacaatgtg
acactgctggagagctgctcccccgagaacggcactgagtacaggacggaagtcacgtat
ttgaatttttctacctcgtacaacttcagcatcaccacgctgtcctgtgagaagatggct
gtccccacccagaacacctgcgtcaccggcatcacagacccccctcctccagatggatcc
cctaatattacatctgtcagtcataattcagtaaaggtcaagttcagtgggtttgaagcc
agccacggacccatcaaagcctacgctgtcattctcaccactggggaagctggtcaccct
tctgcagatgttttgaagtatacgtatgaggattttaaaaagggggcctcggacacttac
gtgacatacctcataaacactgaagaaaaggggcgctctcagggcttgtctgaagtcttg
aaatacgaaatcgacgttgggaatgagtcgaccaccctcggctattacaacgggaagctg
gagcctctgggctcctaccgggcttgtgttgctggcttcaccaatattacctttaacctt
caaaacgagggactcatcaatggagctgagagctatgtgaccttcagtcgttattcagag
gccgttttcttgccccaggatccaggtgtcatctttggagctgtgtttggatgtatcttt
ggtgccctggtcatcgtggctgtgggaggcttcatcttctggaggaagaaaaggaaagat
gcaaagaacaatgaagtgtccttttctcaaattaaacctaaaaaatccaagttaatcaga
gtggagaattttgagacttactttaagaaacagcaagccgactcgaactgtgggttcgca
gaggaatatgaggatctgaagcttgttggaattagtctacccaaatacgcagctgagctg
gctgagaacagaggaaagaatcgctacaataacgttctgccctatgatatttctcgtgtc
aaactttcggtccagacccattccactgatgactatgttaatgccaactacatgccgggc
tatcattccaagaaagattttattgccacacaaggacctttacccaacactttgaaggat
ttttggcgtatggtttgggagaaaaatgtctatgccattgttatgttgaccaaatgtgtt
gaacagggaaggaccaaatgtgaggagtactggccttccaagcaggctcaggactatggg
gatatcactgtggcaatgacatccgaagttgttcttccggaatggaccatcagagatttc
acagtgaaaaatatccagaccagcgagagtcacccgctgcgtcagttccatttcacctcc
tggccggaccatggcgtacccgacaccaccgacctgctcatcaacttccgataccttgtt
cgtgactacatgaagcagagtcctcccgagtcacccattctggtgcactgcagtgctggg
gttggaaggacgggcactttcattgccatcgaccgtcttatctatcagatagagaacgag
agcacggtggacgtgtacggcgttgtgtacgaccttcggatgcacaggcctctcatggtg
cagacagaggaccagtatgttttcctcaatcagtgtgttttggatattatcagatcccag
aaagactccaaagtcgatctcatctaccagaatacaactgcaatgacaatctatgaaaac
cttgagccagtgagcatgtttgggaagaccaatggttacatcgcctaa
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