Sciurus carolinensis (gray squirrel): 124960270
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Entry
124960270 CDS
T08117
Name
(RefSeq) ATP-binding cassette sub-family C member 8 isoform X1
KO
K05032
ATP-binding cassette subfamily C (CFTR/MRP) member 8
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar02010
ABC transporters
ncar04911
Insulin secretion
ncar04930
Type II diabetes mellitus
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124960270
09150 Organismal Systems
09152 Endocrine system
04911 Insulin secretion
124960270
09160 Human Diseases
09167 Endocrine and metabolic disease
04930 Type II diabetes mellitus
124960270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ncar02000
]
124960270
Transporters [BR:
ncar02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC8, 9 subgroups
124960270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
ABC_ATPase
AAA_29
ATPase
AAA_25
nSTAND1
RsgA_GTPase
AAA_23
TMD0_ABC
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
124960270
NCBI-ProteinID:
XP_047374936
LinkDB
All DBs
Position
11:59837842..59911455
Genome browser
AA seq
1583 aa
AA seq
DB search
MPLAFCGSENHSAAYRVDQGVLNNGCFVDALNVVPHVFLLFITFPILFIGWGSQSSKVHI
HHSTWLHFPGHNLRWILTFMLLFVLVCEIAEGILSDGVTESRHLHLYMPAGMAFMAAVTS
VVYYHNIETSNFPKLLIALLIYWTLAFITKTIKFVKFYDHAIGFSQLRFCLTGLLVILYG
MLLLVELNVIRVRRYIFFKTPREVKPPEDLQDLGVRFLQPFVNLLSKGTYWWMNAFIKTA
HKKPIDLRAIGKLPIAMRALTNYRRLCEAFDAQARKDTQSTQGARAIWRALCHAFGRRLV
LSSTFRILADLLGFAGPLCIFGIVDHLGKENHDFQPKTQFLGVYFVSSQEFLANAYVLAV
LLFLALLLQRTFLQASYYVAIETGINLRGAIQTKIYNKIMHLSTSNLSMGEMTAGQICNL
VAIDTNQLMWFFFLCPNLWAMPVQIIVGVILLYYILGVSALIGAAVIILLAPVQYFVATK
LSQAQRSTLEYSNERLKQTNEMLRGIKLLKLYAWENIFCTRVEMTRRKEMTSLRAFAVYT
SISIFMNTAIPIAAVLITFVGHVSFFKESDFSPSVAFASLSLFHILVTPLFLLSSVVRST
VKALVSVQKLSEFLSSAEIREEQCAPREPAPQGQASKYQAVPLKVVNRKRPAREDNRDLM
GPLQRLAPSVDGDADNCCVQIIGGFFTWTPDGIPTLSNITIRIPRGQLTMIVGQVGCGKS
SLLLATLGEMQKISGAVFWNSSLPDGETGEDPSSPEREMVADSDIRKRGPVAYASQKPWL
LNATVEENITFESTFNKQRYKMVIEACSLQPDIDILPHGDQTQIGERGINLSGGQRQRIS
VARALYQHTNVVFLDDPFSALDVHLSDHLMQAGILELLRDDKRTVVLVTHKLQYLPHADW
IIAMKDGTIQREGTLKDFQRSECQLFEHWKTLMNRQDQELEKETVMERKATEPSQGLPHA
MSSRDGLLQDEEEEEEEAAESEEDDNLSSVLHQRAKIPWRACAKYLSSAGILLLSLLVFS
QLLKHMVLVAIDYWLAKWTDSALTLSPASRNCSLSQECALDQTVYAMVFTVLCSLGIVLC
LVTSVTVEWTGLKVAKRLHRSLLSRIILAPMRFFETTPLGSILNRFSSDCNTIDQHIPST
LECLSRSTLLCVSALAVISYVTPVFLVALLPLAVVCYFIQKYFRVASRDLQQLDDTTQLP
LLSHFAETVEGLTTIRAFRYEARFQQKLLEYTDSNNIASLFLTAANRWLEVRMEYIGACV
VLIAAATSISNSLHRELSAGLVGLGLTYALMVSNYLNWMVRNLADMEIQLGAVKRIHGLL
KTEAESYEGLLAPSLIPKNWPDQGKIQIQNLSVRYDSSLKPVLKHVNALISPGQKIGICG
RTGSGKSSFSLAFFRMVDMFEGRIIIDGIDIAKLPLHTLRSRLSIILQDPVLFSGTIRFN
LDPEKKCSDSTLWEALEIAQLKLVVKALPGGLDAIITEGGENFSQGQRQLFCLARAFVRK
TSIFIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVHTILSADLVIVLKRGAILE
FDKPEKLLSQKDSVFASFVRADK
NT seq
4752 nt
NT seq
+upstream
nt +downstream
nt
atgcccctggccttctgcggcagcgagaaccactcggctgcctatcgagtggaccagggc
gtcctcaacaacggctgcttcgtggatgcactcaacgtggtgccgcatgtcttcctgctc
ttcatcaccttccccatcctcttcatcggatggggcagtcagagctccaaggtgcacatc
catcacagcacatggctccatttcccagggcacaatctgcgatggattctgaccttcatg
ctgctctttgtactggtgtgtgagattgcagagggcatcctgtctgatggggtaacggaa
tcccgccatctccacctgtacatgccagctgggatggcgttcatggctgctgtcacctcc
gtggtctactatcacaacatcgagacctccaacttccccaagctgctgatagccctgctt
atctactggaccttggccttcatcaccaagaccatcaagtttgtcaagttctacgaccat
gctatcggcttctcgcagctgcgcttctgcctcaccgggctgctggtgatcctgtacggg
atgctgcttcttgtggagctcaatgtcatcagggtgaggagatacatcttcttcaagaca
ccaagggaggtgaagccccctgaggacctgcaggatctgggggtacgcttcctgcagccc
tttgtgaacctgctatccaagggcacctactggtggatgaatgccttcatcaagacagcc
cacaagaagcccatcgacctgcgagccattgggaaactgcccatcgccatgagggccctc
accaactaccgacggctctgcgaggcctttgatgcccaggcgcggaaggacacacagagc
acccagggtgcccgagccatctggcgggccctctgccatgcctttgggaggcgcttggtc
ctgagcagcactttccgtatcttggctgacttgctgggctttgccgggccactgtgcatc
tttgggattgtggaccaccttgggaaggagaaccacgacttccagcccaagacacaattc
ctcggggtttactttgtctcatcccaagagttccttgctaatgcctacgtcttagctgtg
ctcctgttccttgcccttctactgcaaaggacgtttctacaagcatcctactatgtggcc
attgaaactggaattaacttgagaggagcaatacagaccaagatttataataaaattatg
cacctgtccacctccaacctgtccatgggggaaatgactgctgggcagatctgcaatctg
gtggccatcgacaccaaccaactcatgtggtttttcttcttgtgcccaaacctctgggct
atgccagtacagatcattgtgggtgtgattctcctttactacatcctcggggtcagtgcc
ttaattggagcagctgtcattattctactggctcctgtccaatactttgtggccaccaag
ctctcccaagcccagcggagcacactggaatattccaacgagagactgaagcagaccaat
gagatgcttcgtggcatcaagctgctcaagctgtatgcctgggagaacatcttctgcacc
cgggtggagatgacccgcaggaaggagatgaccagcctccgggcctttgccgtctacacc
tctatctccattttcatgaacacggccatccccatcgcagctgtcctcattaccttcgtg
ggccatgtcagcttcttcaaagagtccgacttctcaccctcagtggcctttgcctccctc
tccctcttccatatcctggtcacaccactgttcctgctatccagtgtggtccgctctaca
gtcaaagctctagtgagtgtgcaaaagctgagcgagttcctgtccagtgcagagatccgt
gaggagcagtgtgctccccgtgagcccgcaccccagggccaagccagcaagtaccaggcg
gtgcccctcaaggttgtgaaccgcaagcgtcctgcccgggaggataatcgggacctcatg
ggccctctgcaaaggctggcccccagtgtagacggggatgctgacaactgctgtgtccag
attattggaggcttcttcacctggaccccggatggaatccccaccctgtccaacattact
attcgaatcccccgaggccagctgaccatgatcgtggggcaggtgggctgcggcaagtcc
tctctcctcctagccacactgggggagatgcagaagatttcaggagctgtcttctggaac
agcagccttcctgacggcgagacgggagaagaccccagcagcccagagcgggagatggtg
gctgactcggacatcaggaagagaggcccagtggcttatgcatctcagaaaccatggctg
ctaaatgctactgtggaagagaatatcacctttgagagtaccttcaacaaacaaaggtac
aagatggtcatcgaagcctgctccctgcagccggacattgacattctgccccacggagac
cagacccagattggggaacggggcatcaacctgtctggtggtcagcgccagcgaatcagt
gtggcccgagcgctctaccagcacaccaacgtggtcttcttggatgatcctttctcagct
ctggatgtccatctgagtgaccacctgatgcaggcagggatccttgagctgctccgggat
gacaagaggactgtggttctggtcacccacaagctacagtacctgccccatgcagactgg
atcattgctatgaaggatggcaccatccagagggagggtacactcaaggacttccagagg
tctgagtgccagctctttgagcactggaagaccctcatgaaccggcaagaccaagagcta
gagaaggagacggtcatggagagaaaagccacagagccatcccagggcctgccccatgct
atgtcctcaagagatggccttctgcaggatgaggaagaagaggaagaggaggcagccgag
agtgaggaagacgacaacctgtcgtcggtgctgcaccagagagccaagatcccatggcgg
gcctgtgccaagtatctgtcctcggcgggcatcctgctcctgtcactgctcgtcttctcc
cagctgctcaagcacatggtcttggtggctatcgactactggctggccaagtggaccgac
agcgccctgacgctgagccctgcgagcaggaactgctccctcagccaggagtgtgccctg
gaccagaccgtctatgccatggtgttcacagtgctctgcagtctgggcatcgtgctgtgc
cttgtcacctctgtcaccgtggagtggacggggctaaaggtggccaagaggctgcaccgc
agcctgctgagccgcatcatcctagcccccatgaggttctttgagaccacaccccttggg
agcatcctgaacagattttcatctgactgtaataccattgaccagcacatcccgtccacg
ttggagtgcctgagccgctccaccctactctgtgtctcggccttggctgtcatctcctat
gtcacacctgtgttccttgtggccctcttgcccctggccgtcgtgtgctacttcatccag
aagtacttccgggtggcatccagggacctacagcagctggatgacactacccagctcccg
ctgctctcacactttgctgagaccgtggaaggcctcaccaccatccgggccttcaggtac
gaggcccggttccagcagaagctcctggaatacacggactccaacaacatcgcctccctc
ttcctcacggctgccaacagatggctggaagttcgcatggagtacatcggtgcgtgtgtg
gtgctcatcgcagctgccacctccatctccaactccctgcacagggagctctctgccggc
ctggtgggcctgggcctcacctatgccttaatggtgtccaactacctcaactggatggtg
aggaacctggcggacatggaaatccagctgggagccgtgaagcggatccatgggctcctg
aaaacggaggcagagagctatgaggggctcctggcaccatcactgatcccgaagaactgg
ccagaccaggggaagattcagatccagaacctgagcgtgcgctacgacagctccctgaag
ccagtgctgaagcatgtcaatgctctcatctccccaggacagaagattggaatctgtggt
cgcacaggcagtgggaagtcctccttctctctcgccttcttccgcatggtggacatgttc
gaagggcgcatcatcattgacggcattgacatcgccaaactgccattgcacaccctgcgc
tcgcgcctctccatcatcctgcaggaccccgtcctcttcagtggcaccatccgattcaac
ctggacccagagaagaagtgctcagacagcacactgtgggaggccctggagatcgcccag
ctgaagctggtggtgaaggcgctgccgggaggcctcgatgccatcatcacagaaggcggg
gaaaatttcagccagggccagcggcagctgttctgcctggctcgggccttcgtgaggaag
acgagcatcttcatcatggatgaggccacagcctccatcgacatggccacggaaaacatc
ctccagaaggtggtgatgacagcctttgcagaccgcactgtggtcaccattgcgcatcga
gtgcacaccatcctgagtgcagacctggtgattgtcctgaagcgtggcgccatcctagag
tttgacaagccagagaagctgctcagccagaaggacagtgtcttcgcttcctttgtccgt
gcagacaagtga
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integrated database retrieval system
