Sciurus carolinensis (gray squirrel): 124960293
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Entry
124960293 CDS
T08117
Name
(RefSeq) tumor susceptibility gene 101 protein
KO
K12183
ESCRT-I complex subunit TSG101
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03250
Viral life cycle - HIV-1
ncar03272
Virion - Hepatitis viruses
ncar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124960293
03272 Virion - Hepatitis viruses
124960293
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124960293
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124960293
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124960293
Membrane trafficking [BR:
ncar04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
124960293
Exosome [BR:
ncar04147
]
Exosomal proteins
Proteins found in most exosomes
124960293
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UEV
Vps23_core
HAUS1
Tuftelin_like
DUF3450
SSNA1
Helical_needle
SPC25_N
STB2_C
T4SS_LegC2C7
CC_Bre1
CEP135_N
FapA
Exonuc_VII_L
DUF7856
ENTR1
FlaC_arch
LEKR1
Prominin
Spc7
CCDC90-like
ANG-1
Phage_scaffold
DUF5685
DUF6212
CRWN_second_CC
Fzo_mitofusin
Motif
Other DBs
NCBI-GeneID:
124960293
NCBI-ProteinID:
XP_047374964
LinkDB
All DBs
Position
11:58907782..58954756
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AA seq
391 aa
AA seq
DB search
MAVSESQLKKMVSKYKYRDLTVRETVNVITLYKDLKPVLDSYVFNDGSSRELMNLTGTIP
VPYRGNTYNIPICLWLLDTHPYNSPICFVKPTSSMTIKTGKHVDANGKIYLPYLHEWKHP
QSDLLGLIQVMIVVFGEEPPVFSRPTISASYPPYQATGPPNTSYMPGMPSGISAYPTGYP
PNPSGYPGCPYPPGGPYPATTSAQYPSQPPVTTVGPSRDGTISEDTIRASLISAVSDKLR
WRMKEEMDRAQAELNALKRTEEDLKKGHQKLEEMVTRLDQEVAEVDKNIELLKKKDEELS
SALEKMENQSENNDIDEVIIPTAPLYKQILNLYAEENAIEDTIFYLGEALRRGVIDLDVF
LKHVRLLSRKQFQLRALMQKARKTAGLSDLY
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtcggagagccagctcaagaaaatggtgtccaagtacaaatacagagaccta
actgtacgtgaaacggtcaatgttattactctgtacaaagatctcaaacctgtattggat
tcatatgtttttaatgatggcagttccagggaactaatgaaccttactggaacaattcct
gtgccttatagaggtaatacatacaatattccaatatgcctatggctgctggacacacac
ccatataattcccctatctgttttgttaaacctactagttcaatgactattaaaacagga
aagcatgttgatgcaaatgggaaaatatatcttccttatctacatgaatggaaacatcca
cagtcagacttgttgggacttattcaggttatgattgtggtatttggagaggaacctcca
gtcttctctcgtcctactatttcagcatcctacccaccataccaggcaacagggccacca
aatacctcctacatgccaggcatgccaagtggaatctctgcatacccaactggataccct
cccaatcccagtggttacccaggctgtccttacccacctggtggtccttaccctgccaca
acaagtgcccaatacccttcccagcctcctgtaaccacggttggtcccagcagagatggc
acaatcagtgaggacaccatccgagcctctctcatttcagcagtcagtgacaaactgagg
tggcgaatgaaagaggaaatggatcgcgctcaggcagagctcaatgccttgaaacgaaca
gaggaagacctgaaaaaaggtcaccagaaactggaagagatggtcacccgtttagatcaa
gaagtagctgaagttgacaaaaacatagaacttttgaaaaagaaggatgaagaactcagt
tctgctttggagaaaatggaaaatcagtctgaaaacaatgatattgatgaagttatcatt
cccacagccccactatataaacagatcctaaatctgtatgcagaggaaaatgctattgaa
gacactatcttttacctgggagaagccttgaggcgaggagtaatagatctggatgtcttc
ttaaagcatgtacgtctgctgtcccgtaaacagttccagttgagggcactaatgcagaaa
gcaagaaagactgctggtcttagtgacctctactga
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integrated database retrieval system
