Sciurus carolinensis (gray squirrel): 124960387
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Entry
124960387 CDS
T08117
Name
(RefSeq) vacuolar protein sorting-associated protein 37C-like
KO
K12185
ESCRT-I complex subunit VPS37
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124960387
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124960387
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ncar04147
]
124960387
Membrane trafficking [BR:
ncar04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
124960387
Exosome [BR:
ncar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124960387
Exosomal proteins of colorectal cancer cells
124960387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mod_r
DUF6212
HLH
RPN13_C
Motif
Other DBs
NCBI-GeneID:
124960387
NCBI-ProteinID:
XP_047375090
LinkDB
All DBs
Position
11:13781206..13804370
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AA seq
348 aa
AA seq
DB search
MESLKDKTLQELEEMQNDPEAIDRLALESPEVQDLQLEREMALATNRSLAERNLEFQGPL
EISRSNLSDKYQELRKLVERCQEQKAKLEKFSSALQPGTLLDLLQIEGMKIEEESEAMAE
KFLEGEVPLEKFLEDFSSMRMLSHLRRVRVEKLQDVVRRPRASQELAGDAPPPRPPPLPL
RPGPQATPPVAEDQPPPQPSVTPPYPLPYSPSPALPVGPTAQGALQPAPFPVVAQPSISY
PGPPGPRAAAGYSWSPQRSVPPRPGYPIAPTSTPGPGYPLAGRAPSPGYPQQAPYLPAGR
KPPYPTQPPLPGFPGQPQPSVPPQPPYPPGPTPPYGFSPPPGPAWPGY
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggagagcctgaaagataagaccctgcaggagctggaggagatgcagaatgacccggag
gcgattgaccggctggccctggagtcccccgaggtccaggacctgcagctggaacgagag
atggcactagccaccaaccggagcctggctgagcggaacctggaattccagggaccccta
gaaatcagccgctcaaacctctcggacaaataccaggagctgcggaagcttgtagaacgg
tgccaggaacagaaggcaaagctggagaagttctcctcagcactgcagccagggaccttg
ttggaccttctgcagatcgaaggcatgaagattgaggaggagtccgaggccatggctgag
aagttcctggagggcgaggtgcccttggaaaagtttctggaggacttctcctccatgagg
atgctgtcccatctgcgccgtgtccgtgtggagaagctccaagatgtggtgaggaggccc
cgagcttcccaggagctggctggagatgcccctccaccccgcccgccacccctgcccctg
cgaccaggccctcaggccacaccccctgtggccgaagaccagccgcctccacagccgtcc
gtcacccctccctaccctttgccctacagcccgtccccggccctgcccgtgggccccact
gcccagggagccctgcagccggcccccttccccgtggtggcccagccctccatctcatac
cctgggcctccgggacccagggctgctgcgggctactcctggtccccgcagaggagcgtt
ccacctcggccaggctaccctatagccccgacaagcacccctggccctgggtacccctta
gcaggcagggcccccagtcctggttatcctcagcaggccccctacctcccagcaggaagg
aaacctccctacccgacacagcctccactcccaggcttcccaggacagccccagccctca
gtgccccctcagcccccgtatcccccggggcccactcctccctatgggttttccccacct
ccgggcccagcctggcccgggtactag
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