Sciurus carolinensis (gray squirrel): 124960430
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Entry
124960430 CDS
T08117
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 12-like
KO
K03035
26S proteasome regulatory subunit N5
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar03050
Proteasome
ncar05010
Alzheimer disease
ncar05012
Parkinson disease
ncar05014
Amyotrophic lateral sclerosis
ncar05016
Huntington disease
ncar05017
Spinocerebellar ataxia
ncar05020
Prion disease
ncar05022
Pathways of neurodegeneration - multiple diseases
ncar05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
124960430
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
124960430
09164 Neurodegenerative disease
05010 Alzheimer disease
124960430
05012 Parkinson disease
124960430
05014 Amyotrophic lateral sclerosis
124960430
05016 Huntington disease
124960430
05017 Spinocerebellar ataxia
124960430
05020 Prion disease
124960430
05022 Pathways of neurodegeneration - multiple diseases
124960430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ncar03051
]
124960430
Proteasome [BR:
ncar03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
124960430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PSMD12-CSN4_N
PCI
RPN5_C
DUF5667
Motif
Other DBs
NCBI-GeneID:
124960430
NCBI-ProteinID:
XP_047375179
LinkDB
All DBs
Position
1:143032079..143033515
Genome browser
AA seq
455 aa
AA seq
DB search
MADGGSERADGRIVKMEVDYSATVDQRLPECEKLAKEGRLQEVIETLLSLEKQTRTASDM
VSTSRILVAVVKMCYEAKEWDLLNENIMLLSKRRSQLKQAVAKMVQQCCTYVEEITDLPV
KLRLIDTLRMVTEGKIYVEIERARLTKTLATIKEQNGDVKEAASILQELQVETYGSMEKK
ERVEFILEQMRLCLAVKDYIRTQIISKKINTKFFQEENTEKLKLKFYNLMIQLDQHEGSY
LSICKHYRAIYDTPCIQAESEKWQQALKSVVLYVILAPFDNEQSDLVHRISGDKKLEEIP
KYKDLLKLFTTMELMLWSTFVEDYGMELRKGSLESPATDVFGSTEEGEKRWKDLKNRVVE
HNIRIMAKYYTPITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGIINFQRPKD
PNNLLNDWSQKLNSLMSLVNKTTHLIAKEEMIHNP
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggcggctcggagcgggctgatgggcgcatcgtcaagatggaagtggactac
agcgctacggtggatcagcgcctgcccgagtgcgagaagctggccaaggaaggaagactt
caagaagtcattgaaacccttctctctttagaaaaacaaacacgtactgcttctgatatg
gtgtctacatcccgaatcttagttgcagtggtgaagatgtgctatgaggctaaagaatgg
gatttacttaatgaaaatattatgcttctgtcaaaaaggcggagtcagttaaaacaagct
gttgcaaaaatggttcagcagtgctgtacttatgttgaagaaatcacagacctcccagtc
aaacttcgattaattgatactctacgaatggttacagaaggaaagatttatgttgaaatt
gaacgtgctcgactgactaaaacattagcaactataaaagagcaaaatggtgacgtgaaa
gaggcagcctccattttacaagaattacaggtggaaacctatgggtcaatggaaaaaaaa
gagcgagtggaatttattctagagcaaatgaggctctgccttgccgtgaaggattatatt
cggacacaaattatcagcaagaaaattaacaccaaatttttccaggaggaaaacacagag
aaattaaagttgaaattttataatttaatgattcagctggatcagcatgagggatcttat
ttgtctatttgtaaacactacagagcaatatatgatactccctgtatacaggcagaaagt
gaaaagtggcagcaggctctgaaaagtgttgttctctatgttatcctggctccctttgac
aatgaacagtcagatttggttcaccgaataagtggtgacaagaagttagaagaaattccc
aagtacaaggatcttttaaagctttttactacaatggagttgatgctatggtccacattt
gttgaagactatgggatggaattaaggaaaggttcccttgagagtccggcaactgatgtt
tttggttctacagaagaaggtgaaaaaaggtggaaagacttgaagaacagagttgttgaa
cataatattagaataatggccaaatattatactccgataacaatgaaaaggatggcacaa
ctccttgatctgtccgtggatgagtcagaggcttttctctcaaatctagtagttaacaag
accatctttgctaaagtagataggttggcaggaatcatcaacttccagagacccaaggat
cccaataatttattaaatgactggtctcagaaactgaactcactgatgtctctggttaac
aaaactacacaccttatagccaaagaggagatgatacataatccataa
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