Sciurus carolinensis (gray squirrel): 124960447
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Entry
124960447 CDS
T08117
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 17
KO
K15133
mediator of RNA polymerase II transcription subunit 17
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
124960447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ncar03021
]
124960447
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Head
124960447
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Med17
SNaCT6
Motif
Other DBs
NCBI-GeneID:
124960447
NCBI-ProteinID:
XP_047375171
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All DBs
Position
11:95056282..95082639
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AA seq
651 aa
AA seq
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MSGVRAVRISIESACEKQVQEVGLDGTETYLQPLSMSQNLARLAQRIDFSQGSGSEEEEA
AGADGDAQDWAGAGSSADQDDEEGLVKFQPSLWPWDSVRNNLRSALTEMCVLYDVLSIVK
DKKFMTLDPVSQDALPPKQNPQTLQLISKKKSLAGAAQILLKGAERLTKSVTENQENKLQ
RDFNSELLRLRQHWKLRKVGDKILGDLSYRSAGSLFPHHGTFEVIKNTDIDLDKKIPEDY
CPLDVQIPSDLEGSAYIKVSIQKQAPDIGDLGTVNLFKRPLPKSKPGSPHWQTKLEAAQN
VLLCKEIFAQLSREAVQIKSQIPHIVVKNQIISQPFPSLQLSISLCHSSNDKKSQKSATE
KQSPEDHLYVLEHNLHLLIREFHKQTLSSIMMPHPASAPFGHKRMRLSGPQAFDKNEINS
LQSSEGLLEKIIKQAKHIFLRSRTAATIDSLASRIDDPQIQAHWSNINDVYESSVKVLIT
SQGYEQICKSIQLQLNIGVEQIRVVHRDGRVITLSHQEQELQDFLLSQMSQHQVHAVQQL
AKVMGWQVLSFSNHVGLGPIESIGNASAITVASPSGDYAISVRNGPESGSKIMVQFPRNQ
CKDIPKSDVLQDGKWNHLRGPFKEVQWNKMEGRNFVYKMELLMSALSPCLL
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggggtgcgcgctgtgcggatcagcatcgagtcggcctgcgagaagcaggtccag
gaggtgggcctggatggcaccgagacttacctgcagccgctgtccatgtcgcagaatctg
gcgcgtctcgctcagcggatcgacttcagccagggttctggttccgaggaggaggaggcg
gcgggggccgacggcgatgctcaggattgggcgggagccggttccagcgccgaccaggac
gacgaggaagggttggtaaaatttcagccttccctttggccttgggactcagtgaggaac
aatttgagaagtgccctgacagagatgtgtgttctctatgatgttcttagtattgttaaa
gataaaaaatttatgactcttgatcctgtttctcaggacgcgcttcctccaaaacagaat
cctcagacattgcaactgatatccaaaaagaagtcacttgctggagcagcacaaatccta
ttgaagggagcggaaagactaactaaatcagttacggaaaatcaagaaaacaagctacaa
agagacttcaactctgagctcttgagattaaggcaacactggaaacttagaaaagttgga
gataaaattcttggggatctgagttacagaagtgcaggatctctttttccccatcatggt
acatttgaagtaataaagaatacagatattgacctggataagaagatacctgaagattac
tgtccccttgatgtccaaattcctagtgatttagaggggtccgcatatatcaaggtttcc
attcaaaaacaggctccagacataggtgatcttggcacggttaacctcttcaaaagacct
ttgcccaaatccaaaccaggttcaccacattggcagacaaaattagaagcagcacaaaat
gttctcttgtgtaaagaaatttttgcacaactctctcgggaagctgttcagatcaaatca
cagatcccacatattgtggtgaaaaatcaaataatctctcagccctttccaagcttgcag
ttgtctatttcgttgtgccattcctcaaatgataagaaatcccaaaaatctgctactgag
aagcaaagtccagaggaccacctctatgttttagagcataatttgcatcttttgattaga
gagtttcataaacagaccttgagttccatcatgatgcctcacccagcaagtgcacctttt
ggccacaagagaatgagactttcaggtcctcaagcttttgataaaaatgaaattaactca
ttacagtccagtgaaggacttctggaaaaaataattaaacaagcaaagcatatttttctg
aggagtagaactgctgcaaccattgacagcttagcaagtcgcattgatgatcctcagata
caggctcattggtcaaatatcaatgatgtttacgaatctagtgtcaaagttttaatcact
tcacaaggttatgaacaaatatgcaagtccattcagctgcagttgaatattggagttgag
cagatccgagttgtacaccgagatggaagagtaattacactgtctcatcaggagcaggag
ctgcaggattttcttctatctcagatgtcacagcatcaggttcatgcagttcaacagcta
gccaaggttatgggctggcaggtactcagcttcagtaatcatgtgggacttgggcccata
gagagtattggcaatgcctctgccataacagtggcctctccaagtggtgactacgctatt
tcagttcgtaatggacctgaaagtggcagcaagattatggttcagtttccccgtaaccag
tgtaaagacattccaaaaagtgatgttttacaagatggcaaatggaatcatcttcgtggg
ccattcaaagaagttcagtggaataaaatggaaggtcgaaactttgtttataaaatggag
ctacttatgtctgcacttagcccttgtctgctatga
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