Sciurus carolinensis (gray squirrel): 124960463
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Entry
124960463 CDS
T08117
Name
(RefSeq) short transient receptor potential channel 2-like
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncar04040
]
124960463
Ion channels [BR:
ncar04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124960463
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GFIT
Motif
Pfam:
XRCC1_N
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
YVC1_C
Syntaxin-18_N
Motif
Other DBs
NCBI-GeneID:
124960463
NCBI-ProteinID:
XP_047375186
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All DBs
Position
11:complement(74746897..74788706)
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AA seq
1261 aa
AA seq
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MAPVKISHVVSFSSQDPKYPVENLLNPDSQRGPWLSCPQDKSRQLKVELQLERAVPISYI
DIGNCGCAFLQIDVGRSSWSLDRPFITLLPATMLMSLTDSKQGKNRLGVRMFKNDDFLAP
ASGESWDRLRLTCSQPFTRHQSFGLAFLRVRSSLDSLDDPVMGLSASVSSELSQGSSDTQ
ASDPHPWLANPSIRRTFFPEAQTSPKEISELKDILKQLQPGTLGRSARMVLSAARRAPSA
SVTSPKSNHAEPGPSLPKNAEPRAQEQSSENNVSRTKRRKMQNQRPLTKSNFQPNRRGTV
RAGQRERRSQAPNNAVQESEQCPICAGSFSIEILPLHAATCGETSPPHPASPSSPSSSQS
ILRVHCVALTPVPLVPRLQPNWTEIVNRKLKFPPPLLGAIQEGRLGLVQQLLESGIETTG
SGPGGPLRNVEEAEDRSWREALNLAIRLGHEAITDVLLANVKFDFRQIHEALLVAVDTNQ
PAVVRRLLARLEREKGRKVDTRSFSLAFFDSSIDGSRFAPGVTPLTLACQKDLYEIAQLL
MDQGHTIARPHPVSCACLECSNARRYDLLKFSLSRINTYRGIASRAHLSLASEDAMLAAF
QLSRELRRLARKEPEFKPEYIALESLSQDYGFELLGMCRNQSEVTAVLNDTGEDSEAEPE
AEGLNQAFEEGIPNLARLRLAVNYNQKRFVAHPICQQVLSSIWCGNLAGWRGSTTIWKLF
VAFLIFLTMPFLCLGYWLAPKSRLGRLLKIPVLKFLLHSASYLWFLIFLLGESLAMETQL
STFRGRSQSVWETSLHMIWVTGFLWFECKEVWIEGLRSYLLDWWNFLDVVILSLYLAAFA
LRLLLAGLAHMHCRDAAEGAACHYFTTAERSEWRTEDPQFLAEVLFAVTSMLSFTRLAYI
LPAHESLGTLQISIGRMIDDMIRFMFILMIILTAFLCGLNNIYVPYQETERLGNFNETFQ
FLFWTMFGMEEHSVVDMPQFLVPEFVGRALYGIFTIVMVIVLLNMLIAMITNSFQKIEDD
ADVEWKFARSKLYLSYFREGLTLPVPFNILPSPKAFFYLLRRIFQFICCCCSCCKTKKPD
YPPIPTYANQGAGAGPGPGEGERGSYRLRVIKALVQRYIETARREFEETRRKDLGNRLTE
LTKTVSRLQSEVAGVQRTLAAGGIPRPPDGASILSRYITRVRNSFQNLGPPIPETPELIM
SGIVGTQNSSETGLQTAGEAGAAASGESGPSSPAHVLVHREQEEGAGDVPPEETLGTNEG
S
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atggctcctgtgaagatcagccatgtggtttcattttcctctcaggatcccaagtatcct
gtggagaacttgctgaacccagatagtcagagggggccttggcttagctgccctcaggac
aagagccggcaactgaaagtggaactacagctagagagagcagtgcccattagctatatc
gatataggtaactgtggctgtgctttcctgcaaattgatgtgggccgttcttcctggtcc
ctagacagacctttcatcaccctgctccctgcaaccatgctaatgtccctcactgattca
aagcaagggaagaaccgcttaggggtccgaatgtttaaaaatgatgatttcctggctcca
gcctcaggagaatcatgggatcgacttcgcctgacttgttcccaacccttcacacgtcat
caatcatttggcctggcctttctgcgagtgcgttcctctctggactccttagatgaccct
gtgatgggtctctcagcctctgtgagctctgagctaagccagggctcttctgacactcag
gcatctgatcctcacccatggctggctaatccttctatccggagaacattcttcccagaa
gcccagacaagccccaaggaaatttcagagctcaaggatatcctaaagcagctgcaacca
gggactctggggcgttcagcccgcatggtgctttctgcagcccgcagggcaccttcagcc
agtgtgacaagcccaaagagcaatcatgcagaaccaggtcccagtcttccaaagaatgca
gagcccagagcacaggagcaaagctcagagaataatgtgagcaggacaaagagacgaaaa
atgcagaaccaaaggcctctgaccaagtcaaacttccagccgaacaggagggggacagta
agggcagggcaaagagaacgccgatcccaggccccaaacaatgctgtccaggagagtgaa
cagtgccccatttgtgcaggttccttcagcattgaaattcttcccctgcatgctgccact
tgtggagagacctccccgcctcacccagcttctccctcctcaccatcttcatcccagtct
atattaagagttcattgtgtggcactaacaccagttcccctggtccccaggctacagcct
aactggactgagatcgtgaacagaaagctcaagttcccgcctccactcttgggtgccatc
caagaggggcgactgggtcttgtgcagcagctgctggagtcagggatcgagaccacaggc
agtgggccaggtgggcccctgcggaatgtggaagaggctgaggatcgctcctggagggaa
gccctcaacctggccatccgcctgggtcatgaagccatcaccgatgtgttactggccaat
gtcaagtttgattttcggcagatccatgaagccctgctagtagcagtggacacaaaccag
ccagcagtggtgcgtcgcctgctggcccggctagaaagggagaagggtcgcaaagtagac
accaggtctttctcactggctttctttgactcatcaatcgatggctcccgctttgcacct
ggtgtcactccactcaccctggcctgccagaaggacctgtatgagattgcgcagttgctc
atggaccagggccacaccattgcccggccccaccctgtctcctgcgcttgtctcgagtgc
agtaatgcccgccgctatgacctgctgaagttctctctgtcccgcatcaacacctaccga
ggcattgctagcagggcccacctctcactggccagtgaggatgccatgctggctgccttc
cagctcagccgtgagctcaggcgtcttgcacgcaaggagcctgagtttaagcctgagtac
attgccctggagtcattgagccaggactatggcttcgagctgctgggtatgtgccggaac
cagagcgaggtcactgcagtgctcaacgacacgggtgaggacagcgaggctgagcctgag
gctgagggactgaaccaagcctttgaggagggcatccccaacctggcaagactgcgactg
gccgtcaactacaaccagaagcggtttgtagcacaccccatctgccagcaagtcctatct
tccatctggtgtgggaatctggccggctggcgtggaagcactaccatctggaagctcttt
gtcgccttcctcatcttcctcactatgcccttcctctgcctcggctactggctggcgccc
aagtctcggctgggccgcctgctgaagatcccagtgctgaagttcctgttacactccgcc
tcctatctatggtttctcatcttcctgctgggagaatccctggccatggagacacaactg
agcactttccgtggccgcagccagagtgtctgggagacttcactacacatgatttgggtc
acaggcttcctgtggttcgagtgtaaggaagtatggatcgagggcctgcgcagttacctc
ctggactggtggaacttcctggatgtggtcattctgtccctgtacctggcagccttcgca
ctgcgcctcctcctggctgggcttgcccacatgcactgcagggatgctgctgaaggcgct
gcctgccactattttaccactgctgaacgaagtgagtggcgcactgaggacccccagttc
ttggctgaggtgctttttgctgtcaccagcatgctcagcttcacccgcctggcctacatt
ctgccagcccacgagtcattgggcactctgcagatttctattggcaggatgattgatgac
atgatacggttcatgttcatcctcatgatcatccttaccgccttcctctgtggcctaaac
aacatctatgtgccctaccaggagacagagcggctgggcaatttcaacgagactttccag
tttctattctggaccatgttcggcatggaggagcacagtgtggtggacatgcctcagttt
ctggtgcctgaatttgtgggccgggccctctatggcatttttaccatcgtcatggtcatt
gtgctgctcaacatgctcatagccatgattacaaactccttccagaagatcgaggatgat
gctgatgtggagtggaagtttgctcgctccaagctctacctgtcctatttccgagagggc
ctgactctgcctgtgcccttcaacatcctgccctcccccaaggccttcttctaccttctc
aggagaattttccagtttatttgctgttgctgctcctgctgcaaaaccaagaagccagac
tatcctccaattcccacttatgccaaccagggggcaggggcagggcctgggcctggggag
ggagagcgtgggtcctaccgcctccgtgtcatcaaggctctggtacagcgctacattgag
actgcccggagagagttcgaggagacacgtcggaaagatctgggcaacagactgacagag
ttaaccaaaactgtatctcgactgcaaagtgaggtagctggtgttcagcgaacgttggca
gcaggagggataccccggcctcctgatggtgccagcatcctcagccgctacatcacccga
gtgcgcaatagtttccagaacctggggccccccatccctgagaccccagagctaatcatg
tcagggattgtaggaactcaaaactcttcagaaaccggacttcagactgctggagaggct
ggggctgcagcttcaggagagtctggcccttcctccccagctcatgtgctggtgcacagg
gagcaagaagagggggctggggatgtgcccccagaggagactctggggaccaatgaaggt
tcctaa
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