Sciurus carolinensis (gray squirrel): 124960553
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Entry
124960553 CDS
T08117
Name
(RefSeq) POU domain, class 2, transcription factor 3 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar05168
Herpes simplex virus 1 infection
ncar05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
124960553
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
124960553
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124960553
03021 Transcription machinery [BR:
ncar03021
]
124960553
Transcription factors [BR:
ncar03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
124960553
Transcription machinery [BR:
ncar03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
124960553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
124960553
NCBI-ProteinID:
XP_047375333
LinkDB
All DBs
Position
11:119362202..119441061
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AA seq
428 aa
AA seq
DB search
MVNLEPMHTDIKMSGDVADSTDARGALSQVEPGNDRNGLDFNRQIKTEDLSDSLQQTLSH
RPCHLSQGPAMMSGNQMSGDMASLHPLQQLVLVPGHLQSVSQFLLSQTQPGQQGLQPNLL
PFPQQNSLLLPQTGPGLASQAVGRPGLPGSSLEPHLEASQHLPVPKHLPNSGGADEPSDL
EELEKFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPL
LEKWLNDAESSPSDPSVSTPSSYPTLSEVFGRKRKKRTSIETNIRLTLEKRFQDNPKPSS
EEISMIAEQLSMEKEVVRVWFCNRRQKEKRINCPVATPIKSPVYSSRMVSPSGTLGPLSV
PPVHSTMPGTVTSSCSPGNNSRPSSPGSGLHASSPTASQNNSKAAMNSSSSFNSSGSWYR
WNHPTYLH
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatctggagcccatgcacacagatatcaagatgagtggggatgtagccgattcc
acagacgcccgcggtgctctcagccaggtggagccaggaaatgatcgaaatggcctagat
ttcaacagacagattaaaacggaggacctcagtgactccctgcagcagaccctctcccat
cggccatgccacctgagccaaggacctgccatgatgtctggaaaccaaatgtctggggac
atggcttctctccatccgctccagcagctcgtgctggttcccggtcacttgcagtctgtt
tcccagttcctgctttctcagacccagcctggacagcaaggtctgcagccgaatcttctc
ccctttccacaacagaacagcctcctcctcccacagacagggcctggccttgcatcccag
gcagttgggcgccctgggctgccaggatcctctttagaaccccatctggaagcatcgcag
catctcccagtgcctaagcatctacccaactctggaggggccgatgagcctagtgacctc
gaggagctggagaagtttgccaagaccttcaagcagaggcgcattaagctgggcttcaca
cagggcgatgtaggtttggccatgggaaagctatatggcaatgacttcagccagactacc
atctcacggttcgaggccctcaacctgagcttcaagaacatgtgcaagctcaagccgtta
ctagagaagtggctgaatgacgcagagtcctctccatcagacccctcagtgagcacacct
agttcctaccccaccctcagcgaagtgtttggcaggaagaggaagaaacggaccagcatc
gagaccaacatccgcctgactctggagaagagatttcaagataaccctaaacccagctca
gaagagatctccatgattgcagagcagctgtccatggagaaagaggtggtgagggtctgg
ttctgcaaccgtcgccaaaaggagaagcgaatcaactgccctgtggccacacccatcaag
tcacctgtctacagctcccgaatggtctctccctcagggactttgggccccctctctgtc
cctcctgtccacagtaccatgcctggaacagtaacgtcatcctgttcccctgggaacaac
agcaggccttcgtctcctggctcaggactccatgccagcagtcccactgcgtctcaaaat
aactccaaagcagcaatgaactcctcctccagctttaactcctcaggatcttggtatcga
tggaatcatcccacctacctccactga
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