Sciurus carolinensis (gray squirrel): 124960589
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Entry
124960589 CDS
T08117
Name
(RefSeq) vacuolar protein sorting-associated protein 51 homolog
KO
K20296
vacuolar protein sorting-associated protein 51
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ncar04131
]
124960589
Membrane trafficking [BR:
ncar04131
]
Protein recycling
Others
EARP complex
124960589
Endosome - Golgi transport
Tethering complex
GARP complex
124960589
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec5
VPS51_Exo84_N
Dor1
Vps54_N
COG2_N
EXOC6_Sec15_N
Occludin_ELL
COG5_N
GIT_CC
TMTC_DUF1736
Vps53_N
Motif
Other DBs
NCBI-GeneID:
124960589
NCBI-ProteinID:
XP_047375399
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All DBs
Position
11:complement(10505118..10519553)
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AA seq
781 aa
AA seq
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MAATAAGPGPASGPGDSPEGPEAEASERRRKAHGMLKLYYGLSEGEAAGRSAGLDPLDPT
DLNGAHFDPEVYLDKLRRECPLAQLMDSETDMVRQIRALDSDMQTLVYENYNKFISATDT
IRKMKNDFRKMEDEMDRLATNMAVITDFSARISATLQDRHERITKLAGVHALLRKLQFLF
ELPSRLTKCVELGAYGQAVRYQGRARAVLQQYQHLPSFRAIQDDCQVITARLAQQLRQRF
REGGSGAPEQAECVELLLALGEPAEELCEEFLAHARGRLEEELSSLEAELGPSPPAPDVL
EFTDRGGSGFVGGLCQVAAAFQELFAAQGPAGAEKLAAFARELGGRYFALVERRLAQEQG
GGDNSLLVRALDRFHRRLRAPGALLAAAGLAEAATEIVERVARERLGHHLQSLRAAFLGC
LTDVRQALAAPRLAGKEGPSLADLLANVASSILSHIKASLAAVHLFTAKEVSFSNKPYFR
GEFCSQGVREGLIVGFIRSMCQTAQSFCDSPGEKGGATPPALLLLLSRLCLDYETATISY
ILTLTDEQFLVQDQSPVTPVSTLCAEARETARRLLTHYVKVQGLVISQMLRKSVETRDWL
STLEPRNVRAVMKRVVEDTTAIDVQVGLLYEEGVRKAQSSDSSKRTFSVYSSSRQQGRYA
PSYTPSAPMDTNLLSNIQKLFSERIDVFSPVEFNKVSVLTGIIKISLKTLLECVRLRTFG
RFGLQQVQVDCHFLQLYLWRFVADEELVHLLLDEVVASAALRCPDPVPMEPSVVEVICER
G
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacagccgccgggccaggcccagcatctggacctggagactccccggaaggg
cccgaggcggaggcttcggagcggcggcggaaggcgcacggaatgctgaagctttactac
ggactctcggaaggggaggcggctggccgctccgcggggctggaccccctggacccgact
gatctcaatggggcacacttcgacccggaagtgtatctggacaagttgcgtagagagtgc
cccctggctcagctgatggacagtgagaccgacatggtgcggcagatccgggctctagac
agcgacatgcagaccctggtctatgaaaactacaacaagttcatctcagccacagacacc
atccggaagatgaagaacgatttccggaagatggaggacgagatggaccggctggccacc
aacatggcggtgatcaccgacttcagtgcgcgcatcagcgccacactacaggaccgccac
gagcgcatcaccaagctggcaggggtacatgcgctgctgcggaagctgcagttcctcttc
gagctgccctcgcgcctcaccaaatgcgtggagctgggcgcctacgggcaggcggtgcgc
taccagggccgcgctcgggccgtgctgcagcagtaccagcacctgccctccttccgtgcc
atccaggacgactgtcaggtcatcacggcccgcctggctcagcagctgcggcagcgcttc
agggagggtggctcgggcgccccggagcaggccgagtgcgtggagctgttgctggccctg
ggcgagcccgctgaggagctgtgcgaggagttcctggcgcatgcgcgcgggagacttgaa
gaggagctgagcagcctggaggctgagctggggccctctcctcctgcgcctgatgtgtta
gagttcactgaccgtggtggcagtggcttcgtgggcggcctctgccaggtggcggcagcc
tttcaggagctgtttgcggcccagggccccgcgggtgccgagaagctggcagccttcgcc
cgggagctgggtggccgatacttcgcactggtggagcggcgactggcccaggagcagggt
ggtggtgacaactcgctgctggtgcgggcgctggatcgcttccaccggcgcctgcgggct
cctggggccctgctggctgctgcagggctcgctgaggctgccactgagatagtggagcga
gtggcccgcgagcgcctgggccatcatctacagagcctgcgggcagccttcctgggctgc
ttgaccgatgtacgacaggcgcttgctgctcctcgcctggctgggaaggaaggccccagc
ctcgctgacttgctggccaatgtggccagctccatcttgagccacatcaaggcctctctg
gcggctgtgcacctcttcactgccaaggaggtgtccttctccaacaagccctacttccgg
ggtgagttctgcagccagggtgtccgagagggtctcatcgtgggcttcatccgctccatg
tgccagactgctcagagtttctgcgacagcccaggagagaagggaggggccacgccccct
gccctgctcctgctgctttcccgcctctgcctggactatgagacagccaccatctcctac
atcctcactctcacggacgagcagtttctggtgcaggaccagtctccagtgacacctgtc
agtacactgtgtgcagaggccagggagacagcacggcgactgctgacccactatgtgaag
gtgcagggcctggtcatatcacagatgctacgcaaaagcgtcgagacgcgggactggctg
agtaccctggagccccggaacgtgcgtgctgtcatgaagcgggttgtggaggacaccacg
gctatcgacgtgcaggtggggctcctgtatgaagagggtgttcgcaaggcccagagcagc
gactccagcaagaggactttctcagtgtacagcagctctcggcagcagggccgctatgca
cccagctacacacccagtgctccaatggacaccaacctcctgagcaacatccagaagctc
ttctctgaacggatcgatgtgttcagccctgtggagttcaacaaggtgtcagtgttgacg
ggcatcattaagatcagtctgaagacgctgctggaatgtgtaaggctgcgcacctttggg
cgcttcgggctgcagcaggtgcaggtggactgccacttcctgcagctctatttgtggcgc
tttgtggcggatgaggagcttgtgcacctactgctcgatgaagtggtggcctcggctgcc
ctacgctgtccggaccctgtgcccatggagcccagtgttgtggaggtcatttgcgagcgc
ggctag
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