Sciurus carolinensis (gray squirrel): 124960602
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Entry
124960602 CDS
T08117
Name
(RefSeq) volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ncar04040
]
124960602
Ion channels [BR:
ncar04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
124960602
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GFIT
Motif
Pfam:
Pannexin_like
LRR_4
LRR_8
LRR_14
LRR_R13L1-DRL21
LRR_At5g56370
LRR_9
LRR_5
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
124960602
NCBI-ProteinID:
XP_047375426
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Position
1:complement(132529480..132650117)
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AA seq
858 aa
AA seq
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MFTLAEVASLNDIQPTYRILKPWWDVFMDYLAVVMLMVAIFAGTMQLTKDQVVCLPVLPS
PVNSKAHTSPGNTDITTEIPKMETAPNQDQDGRTTNDISFGTSAVTPDIPLRATYPHTDS
TVPNQEEKKEKRDPAGRKTNLDFQQYVFINQMCYHLALPWYSKYFPYLALIHTIILMVSS
NFWFKYPKTCSKVEHFVSILGKCFESPWTTKALSETACEDSEENKQRITGAQTLPKHVST
SSDEGSPSASTPMINKTGFKFSAEKPVIEVPSMTILDKKDGEQAKALFEKVRKFRAHVED
SDLIYKLYVVQTVIKTAKFIFILCYTANFVNAISFEHVCKPKVEHLTGYEVFECTHNMAY
MLKKLLISYISIICVYGFICLYTLFWLFRIPLKEYSFEKVREESSFSDIPDVKNDFAFLL
HMVDQYDQLYSKRFGVFLSEVSENKLREISLNHEWTFEKLRQHVSRNAQDKQELHLFMLS
GVPDAVFDLTDLDVLKLELIPEAKIPAKISQMTNLQELHLCHCPAKVEQTAFSFLRDHLR
CLHVKFTDVAEIPAWVYLLKNLRELYLIGNLNSENNKMIGLESLRELRHLKILHVKSNLT
KVPSNITDVAPHLTKLVIHNDGTKLLVLNSLKKMMNVAELELQNCELERIPHAIFSLSNL
QELDLKSNNIRTIEEIISFQHLKRLTCLKLWHNKIVTIPPSITHVKNLESLYFSNNKLES
LPVAVFSLQKLRCLDVSYNNISMIPIEIGLLQNLQHLHITGNKVDILPKQLFKCVKLRTL
NLGQNCITSLPEKIGQLSQLTQLELKGNCLDRLPAQLGQCRMLKKSGLAVEDHLFDTLPL
EVKEALNQDINVPFANGI
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgtttacccttgcggaagttgcttcacttaatgacattcagccaacttaccgaatcctg
aaaccatggtgggacgtgtttatggattacctggctgttgtaatgttgatggtagccatc
tttgcaggaaccatgcaacttaccaaagatcaggtggtctgcttgccagtattgccatct
cctgtaaattcaaaggcacacacatcgccaggaaatactgacatcaccaccgaaatcccg
aagatggaaacggcccctaaccaagaccaagacgggcggacaacaaatgacatttccttt
ggcacatctgctgtgacacctgacatacctctcagagccacgtatcctcacacagattcc
acagttccaaaccaggaggaaaagaaagaaaagagagatccagcgggcaggaaaacaaac
ttggattttcagcaatacgtatttattaatcagatgtgttaccatctggcccttccttgg
tattctaagtactttccgtaccttgctcttatacatactattattctcatggtcagtagc
aacttttggttcaaatatcccaaaacatgctcaaaagtagagcattttgtttcaatacta
ggaaagtgctttgaatctccttggacaactaaagcactgtctgagacagcctgtgaagac
tcagaggaaaacaagcagaggataacaggggcccagactttaccaaagcatgtgtccacc
agcagtgatgaagggagccccagcgccagcaccccaatgatcaacaaaactggcttcaaa
ttctcagccgaaaagcccgtgattgaagttcccagcatgaccatcctggataaaaaagat
ggggaacaggcgaaagccctgttcgagaaagtaaggaaattccgtgcccacgtagaagac
agtgacttgatctataaactctatgtggtccaaacagtcatcaaaacagccaagttcatt
tttattctctgctacactgcaaactttgtcaacgcaatcagcttcgagcatgtctgcaag
ccaaaagtcgagcacctgactggttatgaggtgtttgagtgcacccacaatatggcttac
atgttgaaaaagcttctcatcagttatatatccattatttgtgtttatggttttatctgc
ctctacactctcttctggttattcaggatacctttgaaggaatattcttttgaaaaagtt
agagaagagagcagtttcagtgacattccagatgtcaaaaatgactttgcgttccttctg
cacatggtagaccagtacgaccagctctattccaagcgttttggtgtgttcttgtcggaa
gtcagtgagaacaagctgagggaaatcagtctgaaccatgagtggacatttgagaagctc
aggcagcacgtgtcccgcaacgcccaagacaagcaggagctacacttgttcatgctgtca
ggtgtgccagatgccgtctttgacctcacagacctggatgtgctaaaacttgaactgatt
ccagaagctaaaattcctgctaagatttctcaaatgaccaacctccaagagctccacctc
tgccactgccctgcgaaagttgaacagactgcttttagctttctgcgcgatcacttgaga
tgccttcacgtgaagttcactgatgtggctgaaattcccgcctgggtgtatttgctcaaa
aaccttcgggagttgtacttgataggcaatttgaactcagaaaacaacaagatgatagga
cttgaatctctccgagagttgcggcaccttaagattctccacgtgaagagcaatttgacc
aaagttccctccaacattacagatgtggctccacatcttacaaagttagtcattcataat
gacggcactaaactcttggtactgaacagccttaagaaaatgatgaatgttgccgagctg
gagctccagaactgtgaactagagagaattccacatgctattttcagcctctctaattta
caggaactggatttaaagtcaaataacatacgcacaattgaggagatcatcagtttccag
catttaaaacgactgacttgtttaaaattatggcataataaaattgttaccattcctccc
tccattacccatgtcaaaaacttggagtcactttatttctccaacaacaagctcgagtct
ttaccagtggcagtatttagtttacagaaactcagatgcttagatgtaagctacaacaac
atttcaatgattcccatagaaataggattgcttcagaacctgcagcatttgcatatcact
gggaacaaagtggacattctgccaaaacaattgtttaaatgtgtgaagttgaggactttg
aatctggggcagaactgtatcacctccctcccagaaaaaattggtcagctctcccaactc
acgcagttggagctgaaggggaactgcttggaccgcctgccagcacagctgggccagtgt
cgaatgcttaagaaaagcgggcttgctgtggaagatcacctttttgacactctgccacta
gaagtcaaagaagcattgaatcaagacataaatgttccctttgcaaatgggatttaa
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