Sciurus carolinensis (gray squirrel): 124960613
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Entry
124960613 CDS
T08117
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ncar03000
]
124960613
03036 Chromosome and associated proteins [BR:
ncar03036
]
124960613
Transcription factors [BR:
ncar03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
124960613
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
124960613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_box_2
HMG_WDHD1
bPH_2
Motif
Other DBs
NCBI-GeneID:
124960613
NCBI-ProteinID:
XP_047375435
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Position
11:18072038..18081757
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AA seq
712 aa
AA seq
DB search
MAETLEFNDIYQEVKGSMNDGRLRLSRQGIIFKNSKTGKVDNIQAGELTEGIWRRVALGH
GLKLLTKNGHVYKYDGFRESEFEKLSDFFKTHYRLELMEKDLCVKGWNWGTVKFGGQLLS
FDIGDQPVFEIPLSNVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPTQEDGVDPVEA
FAQNVLSKADVIQATGDAICIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTVL
RLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDISLTLNMNEEEVEKRFEG
RLTKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGFI
YVHKPPVHIRFDEISFVNFARGTTTTRSFDFEIETKQGTQYTFSSIEREEYGKLFDFVNA
KKLNIKNRGLKEKKEGMNPSYDEYADSDEDQHDAYLERMKEEGKIREENANDSSDDSGEE
TDESFNPGEEEEDVAEEFDSNASASSSSNEGDSDRDEKKRKQLKRAKMAKDRKSRKKPME
MKKGKDPNAPKRPMSAYMLWLNASREKIKSDHPGISITDLSKKAGEIWKGMSKEKKEEWD
RKAEDARREYEKAMKEYEGGRGESSKRDKSKKKKKVKVKMEKKSTPSRGSSSKSSSRQLS
ESFKSKEFVSSDESSSGENKSKKKRRRSEDSEEEELASTPPSSEDSASGSDE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggcagagacactggagttcaacgacatctaccaggaggtgaaaggctccatgaatgat
ggtcggctaaggttgagccgccagggtatcatcttcaagaatagcaagactggcaaagtg
gacaacatccaggctggggagttgacagaaggtatctggcgccgtgtagctctgggacat
ggactgaaactcctcacaaagaatggccatgtgtacaagtatgatggcttccgagaatcg
gaatttgagaaactctctgatttcttcaaaactcactatcgccttgagctaatggagaag
gatctatgtgtgaagggctggaattgggggacagtgaagtttggtgggcagctgctttcc
tttgacattggtgaccagccggtctttgagatacccctcagcaatgtgtcccagtgtact
acaggcaagaatgaggtgacactggaattccaccagaacgatgatgcagaggtgtctctc
atggaggtgcgcttctatgtccctcccacccaggaagatggtgtggaccctgttgaggcc
tttgcccagaatgtgctttcaaaggcagatgtaatccaggctactggagatgccatctgc
atcttccgggagctacagtgtctgactccccgtggtcgttacgacatccggatctaccct
acctttctgcacctgcatggcaagacctttgactacaagatcccctacaccactgtactg
cgcctctttttgttgccccacaaggaccaacgccagatgttctttgtgatcagcctcgat
ccccccatcaagcagggccaaacccgttaccacttcctgatcctcctcttctccaaggat
gaggacatctccttgacgctcaacatgaatgaggaagaggtggagaagcgctttgaggga
cggctcaccaagaacatgtcaggatcactctacgagatggtcagccgggtcatgaaggcc
ctggtgaaccgcaagatcacagtcccaggcaacttccaagggcactcaggggcccagtgc
atcacctgctcttacaaggcgagctcagggctgttgtacccgctagagcggggcttcatc
tacgtccacaagccacccgtgcacatccgcttcgatgagatatcctttgtcaactttgcc
cgtggaaccactaccactcgctcctttgactttgagattgagaccaagcagggtactcag
tacaccttcagcagcattgagagggaggagtatggaaagctgtttgattttgtcaatgca
aaaaagctcaacatcaaaaaccgaggattgaaagagaaaaaagagggcatgaacccgagc
tacgacgaatatgcggactctgatgaagaccagcacgatgcctacttggagaggatgaag
gaggagggcaagatccgggaagagaatgccaacgacagcagtgacgactcgggagaggag
acggatgagtcattcaacccaggtgaagaagaggaagacgtggcagaggagtttgacagt
aacgcctctgccagctcctccagtaatgagggcgacagtgaccgagatgagaagaagcgg
aaacagctcaaaagggccaagatggccaaggatcgaaagagccgcaagaaacccatggag
atgaagaagggcaaagaccccaatgcccccaagaggcccatgtctgcatacatgctgtgg
ctgaatgccagccgggagaagatcaagtcagaccatcctggcatcagtatcacagatctt
tccaagaaggcaggcgaaatctggaaggggatgtccaaagagaagaaggaggagtgggac
cggaaggctgaggatgccaggagggaatatgaaaaagccatgaaagaatacgagggaggc
cgaggcgagtcttctaagagggataagtcaaagaagaagaagaaggtaaaagtaaagatg
gaaaagaaatccacaccctctaggggctcgtcatctaagtcatcgtcaaggcagctaagt
gagagcttcaagagcaaagaatttgtgtccagtgatgagagctcttcaggggagaacaag
agcaagaagaagaggcggcggagcgaggattctgaagaagaggaactagccagtactcct
cccagctcagaggactcggcgtcaggctccgatgagtag
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