Sciurus carolinensis (gray squirrel): 124960681
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Entry
124960681 CDS
T08117
Name
(RefSeq) collagen triple helix repeat-containing protein 1
KO
K25700
collagen triple helix repeat-containing protein 1
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ncar03037
]
124960681
Cilium and associated proteins [BR:
ncar03037
]
Other cilia and associated proteins
Stereociliary proteins
124960681
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CTHRC1_C
Collagen
Motif
Other DBs
NCBI-GeneID:
124960681
NCBI-ProteinID:
XP_047375531
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All DBs
Position
1:complement(35657241..35670191)
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AA seq
244 aa
AA seq
DB search
MHPPGRATSPQRGLGLLLLLLLLQLPAPSSASETPKGKQKALIRQREVVDLYNGMCLQGP
AGVPGRDGSPGANGIPGTPGIPGRDGFKGEKGECLRETFEESWTPNYKQCSWSSLNYGID
LGKIAECTFTKMRSNSALRVLFSGSLRLKCRNACCQRWYFTFNGAECSGPLPIEAIIYLD
QGSPELNSTINIHRTSSVEGLCEGIGAGLVDVAIWVGTCSDYPKGDASTGWNSVSRIIIE
ELPK
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcaccccccgggccgcgccacctccccgcagcgggggctcggcctcctgctgttgctg
ctgctgctgcagctgcccgcaccgtctagcgcctctgagacccccaaggggaagcagaag
gcgctgatccggcagagggaggtggtggacctgtacaatggaatgtgtttacaaggacca
gcaggggtgcctggtcgagatgggagtcctggggctaatggcattccaggtacccctggg
atcccaggtcgagatggattcaaaggagaaaagggggaatgcctgagggaaacctttgag
gagtcctggacccctaactacaagcagtgttcatggagttccctgaattatggcatagat
cttgggaaaattgctgagtgtacatttacaaagatgcgttccaacagtgctctgcgagtt
ttgttcagtggctcacttcgactgaagtgcaggaacgcatgctgtcagcgttggtacttc
acattcaatggagctgaatgttcaggacctcttcccattgaagccatcatttatttggac
caaggaagccctgaactgaattcaacaattaatattcaccgtacttcttctgtggaagga
ctctgtgaaggaattggtgctggcttagtggacgttgctatctgggttggtacttgttca
gattacccaaaaggagatgcttctactggatggaattcagtgtctcgcatcattattgaa
gaactacccaaataa
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