KEGG   Sciurus carolinensis (gray squirrel): 124960701
Entry
124960701         CDS       T08117                                 
Name
(RefSeq) platelet-derived growth factor D isoform X1
  KO
K05450  platelet derived growth factor C/D
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar01521  EGFR tyrosine kinase inhibitor resistance
ncar04010  MAPK signaling pathway
ncar04014  Ras signaling pathway
ncar04015  Rap1 signaling pathway
ncar04020  Calcium signaling pathway
ncar04072  Phospholipase D signaling pathway
ncar04151  PI3K-Akt signaling pathway
ncar04510  Focal adhesion
ncar04540  Gap junction
ncar04810  Regulation of actin cytoskeleton
ncar05215  Prostate cancer
ncar05218  Melanoma
ncar05231  Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    124960701
   04014 Ras signaling pathway
    124960701
   04015 Rap1 signaling pathway
    124960701
   04020 Calcium signaling pathway
    124960701
   04072 Phospholipase D signaling pathway
    124960701
   04151 PI3K-Akt signaling pathway
    124960701
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    124960701
   04540 Gap junction
    124960701
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    124960701
 09160 Human Diseases
  09161 Cancer: overview
   05231 Choline metabolism in cancer
    124960701
  09162 Cancer: specific types
   05218 Melanoma
    124960701
   05215 Prostate cancer
    124960701
  09176 Drug resistance: antineoplastic
   01521 EGFR tyrosine kinase inhibitor resistance
    124960701
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:ncar04052]
    124960701
Cytokines and neuropeptides [BR:ncar04052]
 Cytokines
  Growth factors (RTK binding)
   124960701
SSDB
Motif
Pfam: CUB PDGF
Other DBs
NCBI-GeneID: 124960701
NCBI-ProteinID: XP_047375550
LinkDB
Position
11:complement(104304286..104537826)
AA seq 370 aa
MHRLIFVYTLACANFCSYRDTYATPQSASIKALRNANLRRDESNHLTDLYRKEETIHVTG
NGHVQSPRFPNSYPRNLLLTWRLHSQDKTRIQLAFDNQFGLEEAENDICRYDFVEVEDVS
ETSTVIRGRWCGHKEVPPRITSRTNQIKITFKSDDYFVAKPGFRIYYSFVKDFQPAEASE
TNWESVTSSNSGVSYRSSSVTDSALTVEALDKKVAEFDTVEDLLKHFNPESWQEDLENLY
LDTPHYRGRSYHERKSKVDLDRLNDDVKRYSCTPRNYSVNLRQELQLTNAVFFPRCLLVQ
RCGGNCGCGTANSKSCKCNSGKTVKKYHEVLKFEPGNIRRRGLAKNMALVDIQLDHHEQC
DCACSSRPPR
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgcaccggctcatcttcgtctacaccctagcctgcgcaaacttctgcagctatcgggac
acttatgcaactccgcaaagcgcatccatcaaagctttgcgcaacgccaacctcaggcga
gatgagagcaatcacctcacagacttgtaccgaaaagaagaaaccatccatgtgacagga
aatggccatgtacaaagtcctcgcttcccgaatagctaccccaggaacctacttctgaca
tggcggctccattcccaggacaaaacaaggatacagctggcatttgacaatcagtttgga
ttagaggaagcagaaaatgatatctgcaggtatgattttgtggaagttgaggatgtgtct
gaaaccagtacagttatcagaggacgatggtgtggacacaaggaagttcctcctaggata
acatcaagaacaaaccaaattaaaataacattcaaatctgatgactactttgtggcgaaa
cctggattcaggatttattattcttttgtgaaagatttccaacctgcagaagcctcagag
accaactgggagtcagtcacaagttcaaactcgggggtatcctatcgctcttcatcagta
acggattctgctctcactgtggaggctttggacaaaaaagttgcagaatttgatactgtg
gaagatctgctcaagcactttaatccagagtcatggcaagaagatcttgagaatttgtat
ttggacacccctcattatcgtggcaggtcataccatgaacggaaatcaaaagttgacctg
gacaggctcaacgatgatgtcaagcgttacagttgcactcccaggaattactcggtcaat
ttaagacaggagctgcagctgaccaacgcggtcttctttccacgttgcctcctcgtgcag
cgctgtggaggaaattgtggctgtggaactgccaactccaagtcctgcaagtgcaattca
gggaaaactgtgaaaaagtatcatgaggtattgaagtttgaacctggcaatatcaggagg
cggggcctagctaagaacatggctctggttgacatccagttggatcaccatgaacaatgt
gattgtgcctgcagctcaagaccacctcgataa

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