Sciurus carolinensis (gray squirrel): 124960738
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Entry
124960738 CDS
T08117
Name
(RefSeq) RNA-binding protein 14 isoform X1
KO
K13189
RNA-binding protein 14
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ncar03041
]
124960738
Spliceosome [BR:
ncar03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
124960738
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
DbpA
Motif
Other DBs
NCBI-GeneID:
124960738
NCBI-ProteinID:
XP_047375610
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All DBs
Position
11:complement(9174824..9198723)
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AA seq
669 aa
AA seq
DB search
MKIFVGNVDGADTTPEELAALFAPYGTVMSCAVMKQFAFVHMRENAGALRAIEALHGHEL
RPGRALVVEMSRPRPLNTWKIFVGNVSAACTSQELRSLFERRGRVIECDVVKDYAFVHME
KEADAKAAIAQLNGKEVKGKRINVELSTKGQKKGPGLAIQSGDKTKKPGAGDTAFPGTGG
FSATFDYQQAFGNSTGGFDGQARQPTPPFFGRDRSPLRRSPPRASYVAPLTAQPATYRAQ
PSVSLGAAYRAQPSASLGVGYRTQPMTAQAASYRAQPSVSLGAPYRGQLASPSSQSAAAS
SLGPYGGAQPSASALSSYGGQAAAASSLNSYGAQGSSLASYGNQPSSYGAQAASSYGVRA
AASSYNTQGAASSLGSYGAQAASYGAQSAASSLAYGAQAASYNAQPSASYNAQSAPYAAQ
QAASYSSQPAAYVAQPATAAAYASQPAAYAAQATTPMAGSYGAQPVVQTQLNSYGAQASM
GLSGSYGAQSAAAATGSYGAAAAYGAQPSATLAAPYRTQSSASLAASYAAQQHPQAAASY
RGQPGNAYDGAGQPSAAYLSMSQGAVANANSTPPPYERTRLSPPRASYDDPYKKAVAMSK
RYGSDRRLAELSDYRRLSESQLSFRRSPTKSSLDYRRLPDAHSDYARYSGSYNDYLRAAQ
MHSGYQRRM
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgaagatattcgtgggcaacgtcgacggggcggatacaacgccggaggagctggcagcc
ctcttcgcgccctacggcacggtcatgagctgcgccgtcatgaaacagtttgccttcgtg
cacatgcgcgagaacgcaggcgcgctgcgcgccatcgaggccttgcacggccacgagctg
cggccggggcgcgcgctcgtggtggagatgtcgcgcccaaggccgctgaacacttggaag
attttcgtgggcaatgtgtcggccgcatgcacgagccaggaattgcgcagcctcttcgag
cgccgcggacgcgtcatcgagtgtgacgtggtaaaagactacgcgtttgttcacatggag
aaggaagcagatgccaaagccgccatcgcgcagctcaacggcaaagaagtgaagggcaag
cgcatcaacgtggaactctcaaccaagggtcagaagaaggggcctggcctggctatccag
tctggggacaagaccaagaaaccaggggctggggatacggcattccctggaactggtggc
ttctctgccaccttcgactaccaacaggcttttggcaacagcactggtggttttgatggg
caagcccgtcagcccacgccacccttctttggtcgcgaccgaagccccctgcgccgttca
cctccccgagcctcttatgtggctcctctgacggcccagccagccacctaccgggcccag
ccctcagtgtcgctgggagctgcctacagggcccagccttctgcctctttgggtgtcggc
tatcggactcagcccatgacagcccaggcagcctcttaccgcgctcagccctctgtctcc
cttggggccccatacaggggccagctggctagccctagctcccagtctgccgcagcttcc
tcgctcggcccatatggtggagcccaaccctcagcctcagccctctcctcctatgggggt
caggcggctgcagcttcttcactcaactcctatggggctcagggctcctcccttgcctcc
tatggtaaccagccatcctcttatggcgcccaggctgcctcttcctatggggttcgtgca
gctgcttcctcctacaacacccagggagcagcttcctccttaggctcctatggggctcag
gctgcctcctatggggcccagtctgcagcctcctcactagcttatggagcccaggcagct
tcttacaatgcccagccctcggcttcttacaatgcccagtctgccccatatgctgcacag
caggctgcttcctactcttcccagcctgctgcttatgtggcacagccagccacagctgct
gcctatgccagccagccagccgcctacgctgcacaagccactaccccaatggctggctcc
tatggggcccagccagttgtccagacccaactgaatagttatggggcccaagcatcaatg
ggcctgtcaggctcctatggggctcagtcggctgctgcggccactggctcctatggtgcc
gcagctgcctacggggcccagccttctgccaccctggcagctccttaccgcactcagtca
tcagcctcattggctgcttcctatgctgcccagcagcatcctcaggctgctgcctcctac
cgtggccagccgggcaatgcctacgatggggcaggtcagccgtctgcagcctacctgtcc
atgtcccagggggccgttgccaacgccaacagcaccccgccgccctatgagcgtacccgc
ctctccccaccccgggccagctacgacgatccctacaaaaaggctgtcgccatgtcgaaa
aggtatggttccgaccggcgtttagccgagctctctgattaccgccgtttatcagagtcg
cagctttcgttccgccgctcgccgacaaagtcctcgctggattaccgtcgcctgcccgat
gcccattccgattacgcacgctattcgggctcctataatgattacctgcgggcagctcag
atgcactctggctaccagcgccgcatgtag
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