Sciurus carolinensis (gray squirrel): 124960779
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Entry
124960779 CDS
T08117
Name
(RefSeq) condensin-2 complex subunit D3
KO
K11491
condensin-2 complex subunit D3
Organism
ncar
Sciurus carolinensis (gray squirrel)
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ncar03036
]
124960779
Chromosome and associated proteins [BR:
ncar03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin II
124960779
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cnd1
HEAT
HEAT_2
Cnd3
HEAT_GCN1_C
HEAT_EF3_N
DUF3013
Cohesin_HEAT
ZapG-like
Motif
Other DBs
NCBI-GeneID:
124960779
NCBI-ProteinID:
XP_047375662
LinkDB
All DBs
Position
11:complement(133615972..133688538)
Genome browser
AA seq
1481 aa
AA seq
DB search
MVALRGLGSGLQPWCPLDLSLEWVDTVWELDFTETEPLDSSIEAEIIETGLNAFTKLYES
LFPFATEEHDSSESIWTFFIENNISHSTLVALFYHFVQIVHSKNVNVQYREYGLHAAGLY
FLLLEVPGSVANQVFHPVMFDKCIQILKKSWPQESNLNRKRKKEQPKSTHGNPRGNRKRG
KPLRKEDTEMDEIIEEEDDEENICYSARDLSQIRNAIFHLLKNFLRLLPKFSLKEKPQCV
QTCIEVFVTLTNFEPVLHEFNVTQARNLNEAKYMPELAYRGLYLLCSPIHGEGDKVIGCI
FHQLLNVILMLEVEGSHRAPLTITSQVINRRNQAVQFISSLVDELKESIFPVLRILLQHI
CAKVIDKSEYRTSAAQSLVQLLSKLPSGEYATFIAWLYKYSRSSKIPHRVFTLDVVLALL
ELPEREMDGTLSLEHQKFLKHKFLVQEIMFDRCLDKAPTVRSKALSSFAHCLELSISSAS
ESVLELLVNSPIVSGIGIHPGTLLRNSSALSYQRQMFNPSEPPGEINIDNSGEVVGSRER
CVMAMLRKRIRDEKTNVRKSAVQVLVNILKHCDILSMEEDLSILQDHCRDPAVSVRKQAL
QSLTELLMAQPRCVLIQKTWLMGVIPVVMDCESTVQEKALECLDQLLLQNIKHHSKFHGG
DDNQVLAWSLLALLTTESQELSRYLNKAFHIWSKKDKFSSTFINNMISHTGTEHSAPAWM
LLSKIACSSPKLDYTKIMQSWEKISSQQNPNSNTLGHILCVIGHIAKHLPKSTRDKVIDV
VKCKLNGFQWSLELISSAVDTLQRLCRASAKTPVEEQELLKQVCGNVLSTCEYHLSNIVL
KENGAGNMDEDLLVKYIFTLGDIAQLCPAKVEKRVFLLIQSILASSADVDHLPSSQGTSD
APAIQPPSQVKGSVMPSVIRAHAIITLGKLCLQHEDLAKKSIPALVRELEVCEDVAVRNN
VIIVMCDLCIRYTVMVDKYIPNISMCLKDSDPFIRKQTLILLTNLLQEEFVKWKGSLFFR
FVSTLIDSHPDIARFGEFCLAHLLLKRNPVMFFQHFIECIFHFNNYEKHEKYNKFPQSER
EKRLFSLKGKTNKERRMKIYKFLLEHFTDEQRFNITSKICLSILACFADGILPLDMDASE
LLSDTFEVLSSKEIKLLAMRAKPDKDLLMEEDDMALANVVMQEAQKKLISQVQKRNFIEN
IIPIIISLKTVLEKNKIPALRELMNYLREVMQDYRDEIKDFFAVDKQLASELEYDMKKYN
EQLAQEQELAKQGALGLNIMPVPSGQENANVSPATSRPSASGSSTGHTTTLPLTPETGPL
KMLMPSARPMSLSTIAILKSVKKAVESKSRHRSRSLGVLPFTLNSGSPENPCSHASSYSL
ERESNGAIDHVTKRAISTPEKSISDVTFGAGVSYIGTPRTSFSAKEKTEAQSQGNDILCL
SLPDKPPPQPQQWNVKSPARNKDNPTPSRRSLRKIPLKTAN
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgctgcggggccttgggagcggcctgcaaccctggtgcccgctggatctcagc
ctcgaatgggtggacaccgtgtgggaactggacttcacagagactgaaccattggattcc
agcatagaagcagagattatagagactggattgaatgccttcacaaaactctatgaaagt
cttttcccctttgctactgaagaacatgactcttcagagagcatttggacattcttcatc
gagaacaatatttcccatagtacactggtggcattattctatcactttgttcaaatagtt
cattcgaaaaatgtcaatgtacaatatcgagaatatggccttcatgctgcagggctttat
tttttgctattagaagtaccaggcagtgtagccaatcaagtattccacccagtaatgttt
gacaagtgcattcagatactaaagaagagctggcctcaggaatctaacttgaatcgaaaa
agaaagaaagagcagcctaagagcacccatggtaatccaagggggaacagaaaaagagga
aaaccactcaggaaagaagatactgagatggatgaaatcatagaagaagaagatgatgaa
gagaatatttgttattctgcccgggacctttctcaaatccgaaatgccatcttccacctt
ttgaagaattttttaagacttctgcccaagttttccctcaaagaaaaaccacaatgtgta
cagacttgtatagaggtcttcgttacgttaactaattttgaaccagttcttcatgaattt
aatgttacacaagccagaaatcttaatgaagcaaagtacatgccagaactggcttatcgt
ggattgtatttgctgtgttccccaattcatggagaaggagataaggttattggttgcatt
ttccatcaattgctaaatgtaatattgatgttggaagtagaaggatcccatcgtgccccc
cttactatcacatcacaagtcattaatcgtagaaaccaggcagtccagtttattagctcg
cttgtggatgaactgaaagaaagtatatttccagtccttcgtattttactgcagcacatc
tgtgccaaggtaatagataaatcagagtatcgtacttctgcagcacagtctctggttcag
ctgctcagtaaacttccttctggggaatatgctacattcatcgcttggctttacaaatat
tcacgaagttccaagattccacatcgagtttttactcttgatgttgtcttggctctctta
gagctgcctgaaagagagatggatggtaccctctctttggagcatcagaagttccttaag
cacaaattcttggtgcaggaaattatgtttgatcgttgtttagacaaggcacctactgtc
cgcagcaaggcactgtccagctttgcacattgtttggagttgtctattagcagtgcatcg
gagagtgtgttggaactcctcgttaatagtccgatagtttcaggaatagggattcaccct
ggtaccttactgagaaattcatcagctttgtcctaccagagacagatgtttaacccgtct
gaacccccaggggagatcaacatagacaatagtggtgaagtagttggatctagggaaaga
tgtgttatggcaatgttgagaaagagaatcagggatgagaagacaaatgtcaggaagtct
gccgtccaggtattagtgaatattttgaaacactgtgacatcttgagtatggaggaggac
ttatcaattttacaggaccactgtcgggaccctgcagtatctgtccggaagcaggcccta
caatctcttactgaacttcttatggcccaacctagatgtgtcctgatccagaaaacctgg
ctgatgggggtcatcccagtggtgatggactgtgagagcactgtgcaggagaaggctcta
gagtgcctggaccagctcctgttgcagaacataaagcatcacagtaaatttcatgggggg
gatgacaaccaggtactcgcttggtcacttcttgccctcctcactacagaaagccaggaa
ttgagccgctacctaaataaggcttttcatatctggtccaagaaagataaattctcatcc
acttttataaacaatatgatatctcacactggcacagaacattctgcaccagcctggatg
ctgctttccaaaattgcttgctcatcacccaagctggactacaccaaaataatgcagtcc
tgggagaaaatcagcagtcagcaaaatcccaattcaaataccttaggacatatcctgtgc
gtcattgggcatattgcaaagcatcttcctaagagcacccgggacaaggtgattgatgtt
gtcaagtgtaagctgaatggatttcagtggtctctagagctgatcagttcagctgttgac
actttgcaaagactttgtagagcatctgcaaagacaccagtggaggaacaggaactacta
aagcaggtgtgtgggaatgtgctctccacctgcgagtaccacctctccaacattgttctg
aaggagaatggggcagggaacatggatgaagacctgttggtgaagtacatttttactttg
ggagatatagcccagctatgtccggccaaagtggagaaacgagtattccttctgattcag
tccattctggcttcttctgctgacgtggatcacttaccgtcatctcaaggtaccagtgat
gccccagccattcagcccccatctcaggtcaaaggctctgtcatgccttctgtgattaga
gcacatgctatcatcaccttaggtaagctgtgtttacagcatgaagaccttgcaaagaag
agtatcccagcccttgttcgagagttagaggtgtgtgaagacgtagctgttcgcaacaat
gtcatcattgtgatgtgtgatctttgtatccggtacactgtcatggtagacaagtatatt
cctaatatctccatgtgcctgaaggattcagatccatttatccgaaagcagacactcata
ttacttaccaaccttttgcaggaagaatttgtgaaatggaagggctctctgttctttcga
tttgtcagcaccctgatagattcacacccagatattgccagatttggggagttttgcctg
gctcacctgttactgaagaggaaccctgtcatgttctttcagcatttcattgagtgtatt
tttcactttaacaattacgagaagcacgagaagtataacaaattccctcagtcagagaga
gagaagcggctattttcactgaagggaaagacaaacaaggagaggcgaatgaaaatctac
aagtttcttctagagcacttcacagatgagcagcggttcaacatcacttctaaaatctgc
ctaagtattttggcatgcttcgcagatggcatcctgcccctggacatggatgccagtgag
ttactctcagatacatttgaggtcctcagctcaaaggagatcaagcttttagcaatgaga
gctaaaccagataaggatctccttatggaagaagatgacatggccttggcaaacgtagtc
atgcaggaagcccagaaaaagctcatctcccaggttcagaagaggaatttcatagaaaat
atcattccaattatcatctccctgaaaactgtgctggagaaaaataagatcccagctttg
cgggaacttatgaactatctcagggaggtgatgcaagattatcgagatgaaatcaaggat
ttctttgcagttgacaaacaactggcatcagagcttgagtatgacatgaagaagtataat
gaacagctggcccaggagcaagaactggccaaacagggtgctctgggcttaaacataatg
ccagttccttctggccaagaaaatgccaatgtgtccccagccacaagcaggccttcagca
tctgggtccagcactggccacacaaccactttgcctctcacaccagaaaccgggcctctg
aagatgttaatgcccagtgccaggcccatgtccctgagtaccattgcaatcctgaagtct
gtaaagaaggctgtggaatcaaagagtaggcatcgcagtcggagcttaggagtgttgcct
ttcactttaaattctggaagcccagaaaacccgtgcagccatgcatcttcctatagcttg
gagcgagagtctaatggagctattgaccatgtaactaaacgagcaatcagcactcctgag
aaatccatcagtgatgtcacatttggagcaggggtcagttacataggaacaccacggact
tctttttcagccaaagagaaaactgaagcccagagtcaaggaaatgacattttgtgttta
tcattgcctgataaaccacctccccagcctcagcagtggaatgtgaagtctccagccagg
aataaagacaacccaacccctagtcggagatcgctccgaaagatccccctgaaaacagcc
aactga
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