Sciurus carolinensis (gray squirrel): 124961068
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Entry
124961068 CDS
T08117
Name
(RefSeq) E-selectin-like isoform X1
KO
K06494
selectin, endothelial cell
Organism
ncar
Sciurus carolinensis (gray squirrel)
Pathway
ncar04514
Cell adhesion molecule (CAM) interaction
ncar04668
TNF signaling pathway
ncar04933
AGE-RAGE signaling pathway in diabetic complications
ncar05143
African trypanosomiasis
ncar05144
Malaria
ncar05417
Lipid and atherosclerosis
ncar05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
ncar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
124961068
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
124961068
09160 Human Diseases
09174 Infectious disease: parasitic
05144 Malaria
124961068
05143 African trypanosomiasis
124961068
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
124961068
05418 Fluid shear stress and atherosclerosis
124961068
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
124961068
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ncar04515
]
124961068
04090 CD molecules [BR:
ncar04090
]
124961068
04091 Lectins [BR:
ncar04091
]
124961068
Cell adhesion molecules [BR:
ncar04515
]
Lectins
Selectins and C-type lectins
124961068
CD molecules [BR:
ncar04090
]
Proteins
124961068
Lectins [BR:
ncar04091
]
C-Type lectins
Selectins
124961068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sushi
Lectin_C
EGF
hEGF
EGF_Teneurin
EGF_3
EGF_2
EGF_C8A_B_C6
Plasmod_Pvs28
Motif
Other DBs
NCBI-GeneID:
124961068
NCBI-ProteinID:
XP_047375763
LinkDB
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Position
12:113602817..113610978
Genome browser
AA seq
607 aa
AA seq
DB search
MIASQILSTLTFVLLLRESAAWTYGVSTSNMTYDEASAYCQQRYTHLVAIQNKEEIEYLN
ATLSYSPSYYWIGIRKVNGVWVWVGTQKPLTKEAENWAPGEPNNKQNNEDCVEIYIKRPE
GSGMWNDERCSKRKLALCYTAACNQASCSGHGECIETINNYTCRCQPGFRGLECEQVVTC
EAQKDPEHGRLDCTAPFGTFSYSSSCSVSCDEGYLPSSTETSQCTFSGEWSAPPPTCKVV
ECDALAHPPHGTVDCGPNSGSVPWNTTCAFDCEEGFERVGAQNLKCTSTGSWDDEKLRCK
AVTCEAIPMLQNGSVHCVHSKAGELTFKSSCKFTCDGGFRLLGPAQVECTAQGQWSQQIP
VCAAFQCAALSSPERGHVNCLPSASGGFQNGSSCRFSCEPGFALKGSERLECGPTGEWDS
EKPACEAVQCAALSAPRNGSVRCTPSPTGKFPYKSSCTFHCEDGFDLHGSAQLECTSQGQ
WTHEVPSCQVVQCSSLAAPGKVNVSCSGEPVAGTVCEFACPEGWTLNGSAALTCGATGHW
SGTLPTCEALPESNIPLAAGLSAAGTSLLTVTSVLLWLRKKARKFVPASSCQSLESYGNY
QMPSDSI
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgattgcttcacagattctctccactctcacttttgtgctcctccttagagagagtgca
gcctggacttacggtgtgtccacaagcaacatgacttatgacgaggccagtgcttactgt
cagcagaggtacacacatctggtcgcaattcaaaacaaggaggagatcgagtacctgaac
gccacgttgagctattctccaagttactactggatcggaatcagaaaggtcaatggcgtg
tgggtctgggtggggacccagaagcccctgaccaaagaagccgagaactgggctccagga
gaaccaaacaacaagcagaacaacgaggactgcgtggagatctacatcaagagaccagaa
ggttccggcatgtggaacgatgagagatgcagcaagaggaagcttgcgctgtgctacaca
gctgcctgcaaccaggcctcctgcagtggccatggcgagtgtatagagaccatcaacaac
tacacctgcaggtgtcagcccggcttccgtggactcgagtgtgagcaagttgtgacctgt
gaagcacagaaggaccctgagcatggaaggctggattgcactgcaccctttgggaccttc
agctacagttcctcctgctccgtcagctgcgatgagggctacctgccaagcagcacggag
accagccagtgtacattctctggggaatggagtgctcctcctcccacctgcaaagtggtt
gagtgtgatgctttggcacacccaccccacggcactgtggactgtggcccgaactctgga
agtgtcccctggaacaccacgtgtgcctttgactgtgaggaaggatttgagcgcgtggga
gcgcagaacctgaagtgcacctccaccgggagctgggatgatgagaagctgcggtgcaaa
gctgtgacgtgtgaagccatccccatgctgcagaacggctctgtgcactgtgtccactcc
aaggctggagagctcaccttcaagtcgtcctgcaaattcacctgtgacgggggcttcagg
ctgctggggccagcccaggtcgaatgcacagcacaaggccagtggtcacagcaaattcca
gtgtgtgcagctttccagtgtgcagccttatccagcccggagcgaggccatgtgaattgt
cttcctagtgcttctggaggcttccaaaatggatccagctgtaggttctcctgtgagcca
ggatttgctttgaagggatctgaaaggctcgagtgtggccccactggggagtgggacagt
gagaagcccgcgtgtgaagctgtgcagtgtgctgctctctctgcgccccggaacggctct
gtgaggtgcactccttcccccactgggaagttcccctacaagtcctcttgcaccttccac
tgtgaggacggctttgacctacacggatcagctcagctggagtgcacatctcagggacag
tggacacacgaggtcccctcctgccaagtggtgcagtgctcaagcctggcagctccagga
aaggtcaacgtgagctgcagtggagagcctgtggctggcactgtgtgtgagtttgcgtgt
cccgaaggctggacgctcaatggctctgcggctctgacgtgtggtgccacaggacactgg
tctgggacgctgcctacctgtgaagctctgcccgagtccaacattcccttggcagctgga
ctttctgctgcaggaacctctctcctgacagtgacatcagttctcctctggcttcggaag
aaagcaaggaaatttgtccctgctagcagctgccaaagcctggaatcctatggaaactac
cagatgccttcagactccatctaa
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