KEGG   Sciurus carolinensis (gray squirrel): 124961068
Entry
124961068         CDS       T08117                                 
Name
(RefSeq) E-selectin-like isoform X1
  KO
K06494  selectin, endothelial cell
Organism
ncar  Sciurus carolinensis (gray squirrel)
Pathway
ncar04514  Cell adhesion molecule (CAM) interaction
ncar04668  TNF signaling pathway
ncar04933  AGE-RAGE signaling pathway in diabetic complications
ncar05143  African trypanosomiasis
ncar05144  Malaria
ncar05417  Lipid and atherosclerosis
ncar05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:ncar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04668 TNF signaling pathway
    124961068
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    124961068
 09160 Human Diseases
  09174 Infectious disease: parasitic
   05144 Malaria
    124961068
   05143 African trypanosomiasis
    124961068
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    124961068
   05418 Fluid shear stress and atherosclerosis
    124961068
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    124961068
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:ncar04515]
    124961068
   04090 CD molecules [BR:ncar04090]
    124961068
   04091 Lectins [BR:ncar04091]
    124961068
Cell adhesion molecules [BR:ncar04515]
 Lectins
  Selectins and C-type lectins
   124961068
CD molecules [BR:ncar04090]
 Proteins
  124961068
Lectins [BR:ncar04091]
 C-Type lectins
  Selectins
   124961068
SSDB
Motif
Pfam: Sushi Lectin_C EGF hEGF EGF_Teneurin EGF_3 EGF_2 EGF_C8A_B_C6 Plasmod_Pvs28
Other DBs
NCBI-GeneID: 124961068
NCBI-ProteinID: XP_047375763
LinkDB
Position
12:113602817..113610978
AA seq 607 aa
MIASQILSTLTFVLLLRESAAWTYGVSTSNMTYDEASAYCQQRYTHLVAIQNKEEIEYLN
ATLSYSPSYYWIGIRKVNGVWVWVGTQKPLTKEAENWAPGEPNNKQNNEDCVEIYIKRPE
GSGMWNDERCSKRKLALCYTAACNQASCSGHGECIETINNYTCRCQPGFRGLECEQVVTC
EAQKDPEHGRLDCTAPFGTFSYSSSCSVSCDEGYLPSSTETSQCTFSGEWSAPPPTCKVV
ECDALAHPPHGTVDCGPNSGSVPWNTTCAFDCEEGFERVGAQNLKCTSTGSWDDEKLRCK
AVTCEAIPMLQNGSVHCVHSKAGELTFKSSCKFTCDGGFRLLGPAQVECTAQGQWSQQIP
VCAAFQCAALSSPERGHVNCLPSASGGFQNGSSCRFSCEPGFALKGSERLECGPTGEWDS
EKPACEAVQCAALSAPRNGSVRCTPSPTGKFPYKSSCTFHCEDGFDLHGSAQLECTSQGQ
WTHEVPSCQVVQCSSLAAPGKVNVSCSGEPVAGTVCEFACPEGWTLNGSAALTCGATGHW
SGTLPTCEALPESNIPLAAGLSAAGTSLLTVTSVLLWLRKKARKFVPASSCQSLESYGNY
QMPSDSI
NT seq 1824 nt   +upstreamnt  +downstreamnt
atgattgcttcacagattctctccactctcacttttgtgctcctccttagagagagtgca
gcctggacttacggtgtgtccacaagcaacatgacttatgacgaggccagtgcttactgt
cagcagaggtacacacatctggtcgcaattcaaaacaaggaggagatcgagtacctgaac
gccacgttgagctattctccaagttactactggatcggaatcagaaaggtcaatggcgtg
tgggtctgggtggggacccagaagcccctgaccaaagaagccgagaactgggctccagga
gaaccaaacaacaagcagaacaacgaggactgcgtggagatctacatcaagagaccagaa
ggttccggcatgtggaacgatgagagatgcagcaagaggaagcttgcgctgtgctacaca
gctgcctgcaaccaggcctcctgcagtggccatggcgagtgtatagagaccatcaacaac
tacacctgcaggtgtcagcccggcttccgtggactcgagtgtgagcaagttgtgacctgt
gaagcacagaaggaccctgagcatggaaggctggattgcactgcaccctttgggaccttc
agctacagttcctcctgctccgtcagctgcgatgagggctacctgccaagcagcacggag
accagccagtgtacattctctggggaatggagtgctcctcctcccacctgcaaagtggtt
gagtgtgatgctttggcacacccaccccacggcactgtggactgtggcccgaactctgga
agtgtcccctggaacaccacgtgtgcctttgactgtgaggaaggatttgagcgcgtggga
gcgcagaacctgaagtgcacctccaccgggagctgggatgatgagaagctgcggtgcaaa
gctgtgacgtgtgaagccatccccatgctgcagaacggctctgtgcactgtgtccactcc
aaggctggagagctcaccttcaagtcgtcctgcaaattcacctgtgacgggggcttcagg
ctgctggggccagcccaggtcgaatgcacagcacaaggccagtggtcacagcaaattcca
gtgtgtgcagctttccagtgtgcagccttatccagcccggagcgaggccatgtgaattgt
cttcctagtgcttctggaggcttccaaaatggatccagctgtaggttctcctgtgagcca
ggatttgctttgaagggatctgaaaggctcgagtgtggccccactggggagtgggacagt
gagaagcccgcgtgtgaagctgtgcagtgtgctgctctctctgcgccccggaacggctct
gtgaggtgcactccttcccccactgggaagttcccctacaagtcctcttgcaccttccac
tgtgaggacggctttgacctacacggatcagctcagctggagtgcacatctcagggacag
tggacacacgaggtcccctcctgccaagtggtgcagtgctcaagcctggcagctccagga
aaggtcaacgtgagctgcagtggagagcctgtggctggcactgtgtgtgagtttgcgtgt
cccgaaggctggacgctcaatggctctgcggctctgacgtgtggtgccacaggacactgg
tctgggacgctgcctacctgtgaagctctgcccgagtccaacattcccttggcagctgga
ctttctgctgcaggaacctctctcctgacagtgacatcagttctcctctggcttcggaag
aaagcaaggaaatttgtccctgctagcagctgccaaagcctggaatcctatggaaactac
cagatgccttcagactccatctaa

DBGET integrated database retrieval system